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torsdag 11 november 2021

Sars-2 viruksen Gamma-variantti (P.1.) löytyy B.1.1. viruspuusta ja sen Gamman juuri P.1.1.28 merkitään P-kirjaimella. P,2. (Zeta). P.3.(Theta).

Lineage Most common countries Earliest date # designated # assigned Description WHO Name
B.1.1.28Brazil 70.0%, Philippines 14.0%, United States of America 5.0%, Japan 2.0%, Paraguay 2.0%2020-03-058542808Brazil mostly, absorbed B.1.1.94 and B.1.1.143
P.1Brazil 55.0%, United States of America 29.0%, Chile 3.0%, Peru 2.0%, Spain 1.0%2020-04-073039358783Alias of B.1.1.28.1, Brazilian lineage with a number of spike mutaions with likely functional significance E484K, K417T, and N501Y. Described in https://virological.org/t/genomic-characterisation-of-an-emergent-sars-cov-2-lineage-in-manaus-preliminary-findings/586.Gamma
P.1.1Italy 74.0%, Germany 10.0%, Brazil 6.0%, United States of America 5.0%, Luxembourg 2.0%2020-12-3026472875Alias of B.1.1.28.1.1, European lineage in Italy and Germany
P.1.2Brazil 66.0%, Argentina 24.0%, Spain 4.0%, Netherlands 3.0%, United States of America 1.0%2021-01-03600833Alias of B.1.1.28.1.2, Netherlands/Brazil lineage. Imported into Netherlands, likely with local transmission here and continued circulation within and/or reintroduction into Brazil, pango-designation issue #56
P.1.3Brazil 100.0%2021-03-122929Alias of B.1.1.28.1.3, Brazil lineage, from pango-designation issue #141
P.1.4Brazil 98.0%, Costa_Rica 1.0%, Peru 1.0%, United States of America 0.0%, Colombia 0.0%2021-03-193261023Alias of B.1.1.28.1.4, Brazil lineage, from pango-designation issue #141
P.1.5Brazil 100.0%2021-04-031213Alias of B.1.1.28.1.5, Brazil lineage, from pango-designation issue #141
P.1.6Brazil 99.0%, United States of America 1.0%, Sweden 0.0%, French_Guiana 0.0%2021-03-26211512Alias of B.1.1.28.1.6, Brazil lineage, from pango-designation issue #141
P.1.7Brazil 90.0%, United States of America 5.0%, Spain 2.0%, Peru 1.0%, Chile 0.0%2021-01-1215292883Alias of B.1.1.28.1.7, Brazil lineage, from pango-designation issue #141
P.1.8Brazil 93.0%, Sweden 1.0%, France 1.0%, United Kingdom 1.0%, Spain 1.0%2021-05-03173206Alias of B.1.1.28.1.8, Brazil lineage, from pango-designation issue #164
P.1.9Brazil 95.0%, Mexico 2.0%, Belgium 1.0%, United States of America 1.0%, Finland 0.0%2021-03-18159223Alias of B.1.1.28.1.9, Brazil lineage, from pango-designation issue #174
P.1.10United States of America 93.0%, Brazil 4.0%, Puerto_Rico 0.0%, Mexico 0.0%, Spain 0.0%2021-02-1024983342Alias of B.1.1.28.1.10, predominantly USA lineage, from pango-designation issue #179
P.1.10.1Aruba 100.0%2021-04-258383Alias of B.1.1.28.1.10.1, Aruba lineage, from pango-designation issue #179
P.1.10.2Mexico 100.0%2021-05-172424Alias of B.1.1.28.1.10.2, Mexico lineage, from pango-designation issue #179
P.1.11Brazil 98.0%, Spain 1.0%, United States of America 1.0%2021-05-103596Alias of B.1.1.28.1.11, Brazil lineage, from pango-designation issue #164
P.1.12Peru 53.0%, United States of America 18.0%, Brazil 16.0%, Mexico 6.0%, Chile 2.0%2020-04-255591636Alias of B.1.1.28.1.12, predominantly Peru lineage, from pango-designation issue #212
P.1.13United States of America 99.0%, Brazil 1.0%, Germany 0.0%, Chile 0.0%, Aruba 0.0%2021-02-24930999Alias of B.1.1.28.1.13, USA lineage, from pango-designation issue #231
P.1.14Canada 70.0%, Brazil 28.0%, United States of America 1.0%, Japan 0.0%, Argentina 0.0%2020-11-031564117677Alias of B.1.1.28.1.14, predominantly Canada lineage, from pango-designation issue #231
P.1.15Chile 59.0%, Argentina 22.0%, United States of America 9.0%, Brazil 4.0%, Mexico 1.0%2020-03-2327554078Alias of B.1.1.28.1.15, predominantly Chile lineage, from pango-designation issue #231
P.1.16Belgium 70.0%, Netherlands 13.0%, Germany 4.0%, France 3.0%, Turkey 3.0%2020-07-2121962525Alias of B.1.1.28.1.16, predominantly Belgium lineage also in other countries in Europe, from pango-designation issue #231
P.1.17United States of America 61.0%, Mexico 30.0%, Germany 2.0%, Spain 2.0%, Brazil 1.0%2020-12-1929975896Alias of B.1.1.28.1.17, predominantly USA and Mexico lineage, from pango-designation issue #231
P.1.17.1Luxembourg 80.0%, Germany 9.0%, France 5.0%, Belgium 4.0%, Netherlands 1.0%2021-04-028901073Alias of B.1.1.28.1.17.1, predominantly in Luxembourg, from pango-designation issue #231
P.2Brazil 55.0%, United States of America 26.0%, Canada 4.0%, Argentina 2.0%, Suriname 2.0%2020-04-134244863Alias of B.1.1.28.2, Brazilian lineageZeta
P.3Philippines 83.0%, United States of America 3.0%, Germany 2.0%, Malaysia 2.0%, United Kingdom 2.0%2021-01-0831549Alias of B.1.1.28.3, Lineage predominantly in the Philippines with spike mutations E484K, N501Y, P681H, 141-143del. Described in Tablizo et al 2021: https://www.medrxiv.org/content/10.1101/2021.03.03.21252812v2Theta
P.4Brazil 100.0%2021-02-17112256Alias of B.1.1.28.4, Brazil lineage, pango-designation issue #68
P.5Brazil 84.0%, Philippines 13.0%, Italy 1.0%, United Kingdom 1.0%2021-01-262476Alias of B.1.1.28.5, Brazil lineage, pango-designation issue #86
P.6Uruguay 98.0%, Brazil 1.0%, United States of America 1.0%, Spain 0.0%2020-12-02171248Alias of B.1.1.28.6, Uruguay lineage, from pango-designation issue #148
P.7Brazil 77.0%, Uruguay 6.0%, Paraguay 5.0%, France 5.0%, Argentina 3.0%2020-06-24166194Alias of B.1.1.28.7, Brazil lineage, from pango-designation issue #29

 

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