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Visar inlägg med etikett JEV. Visa alla inlägg
Visar inlägg med etikett JEV. Visa alla inlägg

torsdag 12 april 2018

Japanin enkefaliittvirus ja luonnollinen immuunivaste. TRIM21

TRIM6 luonnollisen immuunivastenfaktori  osllistuu Japanin enkefaliittivirusinfektion  sykliin.

https://link.springer.com/article/10.1186/1742-2094-11-24

Background

Japanese encephalitis virus (JEV) infection leads to Japanese encephalitis (JE) in humans. JEV is transmitted through mosquitoes and maintained in a zoonotic cycle. This cycle involves pigs as the major reservoir, water birds as carriers and mosquitoes as vectors. JEV invasion into the central nervous system (CNS) may occur via antipodal transport of virions or through the vascular endothelial cells. Microglial cells get activated in response to pathogenic insults. JEV infection induces the innate immune response and triggers the production of type I interferons. The signaling pathway of type I interferon production is regulated by a number of molecules. TRIM proteins are known to regulate the expression of interferons; however, the involvement of TRIM genes and their underlying mechanism during JEV infection are not known.


Japanese encephalitis virus (JEV), a flavivirus with single-stranded RNA, is the leading cause of viral encephalitis in most of southeast Asian countries. JEV is transmitted through mosquitoes and maintained in a zoonotic cycle. This cycle involves pigs as the major reservoir/amplifying host, water birds as carriers and mosquitoes as vectors [1]. The estimated worldwide annual incidence of Japanese encephalitis (JE) is about 45,000 human cases and 10,000 deaths [2]. JE leads to long-term neurological damage and significant mortality among children. Approximately 25% of encephalitis patients die, while about 50% of the survivors develop permanent neurologic and/or psychiatric sequelae [1].

The flaviviruses are known to induce proinflammatory response in CNS after infection.

A key step toward induction of innate immunity against viral infections, including JEV, is the production of type I interferons. The presence of virus is sensed by pattern recognition receptors (PRRs) such as Toll-like receptors (TLRs) and RIG-I (retinoic acid-inducible gene 1)-like receptors (RLRs) [3, 4]. The engagement of these (receptors) through pathogen molecular patterns can lead to the production of various cytokines and chemokines and other proinflammatory factors. The key regulators of the induction of type I IFNs during viral infections are RIG-I and MDA5 (melanoma differentiation-associated protein 5) [5, 6, 7, 8, 9, 10]. These are known to interact with MAVS (mitochondrial antiviral signaling protein), which leads to downstream activation of various kinases such as TBK1/IKKε (TANK-binding kinase 1/I kappa B Kinase-ε), which in turn lead to phosphorylation and activation of various transcription factors to induce IFN-β and IFN-α [11, 12, 13]. The production of type I interferons is crucial for generating antiviral response against viruses. Production of interferons is mediated by various transcription factors such as interferon regulatory factors (IRF). Among the IRF family members, IRF-3 has been well documented to play a role in expression of type I interferons in response to viral infections. Phosphorylation of IRF-3 leads to activation, dimerization and nuclear translocation, ultimately leading to the transcription and production of IFN-β. IFN-β further initiates a cascade of signaling events mediated by IRF-7 and IRF-5 resulting in the production of IFN-γ and activation of various interferon-stimulated genes (ISGs) [8, 14].
The TRIM family (tripartite-motif family) of proteins has been reported for their roles in regulating the innate immune response to viral infections [15]. TRIM proteins are structurally characterized by a RING domain, a B-box domain and a coiled-coil domain [16, 17]. Functionally, most TRIMs are E3 ubiquitin ligases, where RING domains have ubiquitin ligase activity, while the b-Box domains have interacting motifs. TRIM proteins have been reported for their roles in cellular processes such as cell differentiation, transcriptional regulation, signaling cascades and apoptosis [15, 18, 19]. Many TRIM proteins play important roles in antiviral activities [20]. TRIM5 and TRIM22 are known to restrict HIV replication, while TRIM19 has been reported to restrict VSV and herpes simplex virus (HSV) replication [21, 22, 23, 24]. TRIM21 has been known to play a crucial role in regulating type I interferon production, but its role during viral infections is not well understood [25, 26]. TRIM21 interacts and ubiquitinates IRF-3, IRF-7 and IRF-8 [27]. Due to such interactions, TRIM21 has been implicated in regulating type I interferon signaling directly by modulating the upstream transcription factors. TRIM21 is part of the RoSSA ribonucleoprotein, which includes a single polypeptide and one of four small RNA molecules. TRIM21 has been reported to recognize and degrade viruses in the cytoplasm by binding to antibody-coated virions [28].
This is the first report showing the role of TRIM21 in modulating the type I interferon response upon JEV infection in human microglial cells. We have demonstrated that induction of TRIM21 during JEV infection is a compensatory mechanism to downregulate the type I interferon production mediated by IRF-3. TRIM21 overexpression leads to downregulation of JEV-mediated activation of IRF-3 and downstream IFN-β production, whereas silencing of TRIM21 results in facilitation of JEV-mediated activation of IRF-3 and upregulation of IFN-β production. We thereby report the inhibitory role of TRIM21 on IFN-β production during JEV infection in human microglial cells.

söndag 13 november 2016

FLAVIVIRUSTAXONOMIAA

https://flavivirus.wordpress.com/taxonomy-2/
Otan tähän sitaatin koko tunnetusta  ryhmästä ja katson missä siellä piilee nykyään  leviävä ZIKA-virus.

Flavivirus

o Aroa virus
Bussuquara virus
Iguape virus
Naranjal virus
o Dengue virus group
o Dengue virus
Dengue virus 1
Dengue virus 2
Dengue virus 3
Dengue virus 4
o Japanese encephalitis virus group
o Japanese encephalitis virus
Japanese encephalitis virus strain JAOARS982
Japanese encephalitis virus strain Nakayama
Japanese encephalitis virus strain SA(V)
Japanese encephalitis virus strain SA-14
Koutango virus
o Murray Valley encephalitis virus
Alfuy virus
Murray valley encephalitis virus (strain MVE-1-51)
o St. Louis encephalitis virus
St. Louis encephalitis virus (strain MS1-7)
Usutu virus
o West Nile virus
Kunjin virus
West Nile virus crow/New York/3356/2000
West Nile virus H442
West Nile virus SA381/00
West Nile virus SA93/01
West Nile virus SPU116/89
West Nile virus strain 385-99
West Nile virus strain PT5.2
West Nile virus strain PT6.16
West Nile virus strain PT6.39
West Nile virus strain PT6.5
West Nile virus strain PTRoxo
o Kokobera virus group
o Kokobera virus
New Mapoon virus
Stratford virus
o unclassified Kokobera virus group
CY1014 virus
o Modoc virus group
Cowbone Ridge virus
Jutiapa virus
Modoc virus
Sal Vieja virus
San Perlita virus
o mosquito-borne viruses
o Ilheus virus
Rocio virus
Sepik virus
o Ntaya virus group
Bagaza virus
Israel turkey meningoencephalomyelitis virus
Ntaya virus
o Tembusu virus
Sitiawan virus
Yokose virus
o Rio Bravo virus group
Apoi virus
Bukalasa bat virus
Carey Island virus
Dakar bat virus
Entebbe bat virus
Rio Bravo virus
o Saboya virus
Potiskum virus
o Seaborne tick-borne virus group
Meaban virus
Saumarez Reef virus
Tyuleniy virus
o Spondweni virus group
o Zika virus
Spondweni virus
o Tick-borne encephalitis virus TBEV- group
o Kyasanur forest disease virus
Alkhurma hemorrhagic fever virus
o Langat virus
Langat virus (strain TP21)
Langat virus (strain Yelantsev)
o Louping ill virus
Louping ill virus (strain 31)
Louping ill virus (strain K)
Louping ill virus (strain Negishi 3248/49/P10)
Louping ill virus (strain Norway)
Louping ill virus (strain SB 526)
Omsk hemorrhagic fever virus
Phnom Penh bat virus
o Powassan virus
Deer tick virus
Tick-borne powassan virus (strain lb)
o Royal Farm virus
Karshi virus
o Tick-borne encephalitis virus TBEV
Kumlinge virus
Negishi virus
Tick-borne encephalitis virus (strain HYPR)
Tick-borne encephalitis virus (STRAIN SOFJIN)
Tick-borne encephalitis virus (WESTERN SUBTYPE)
Turkish sheep encephalitis virus
Yaounde virus
o Yellow fever virus group
Banzi virus
Bouboui virus
Edge Hill virus
Uganda S virus
Wesselsbron virus
o Yellow fever virus
Yellow fever virus 17D
Yellow fever virus 1899/81
Yellow fever virus isolate Angola/14FA/1971
Yellow fever virus isolate Ethiopia/Couma/1961
Yellow fever virus isolate Ivory Coast/1999
Yellow fever virus isolate Ivory Coast/85-82H/1982
Yellow fever virus isolate Uganda/A7094A4/1948
Yellow fever virus strain French neurotropic vaccine
Yellow fever virus strain Ghana/Asibi/1927
Yellow fever virus Trinidad/79A/1979
o unclassified Flavivirus
Aedes flavivirus
Batu Cave virus
Cacipacore virus
Calbertado virus
Cell fusing agent virus
Chaoyang virus
Chimeric Tick-borne encephalitis virus/Dengue virus 4
Culex flavivirus
Culex theileri flavivirus PoMoFlav_A131
Culicinae flavivirus PoMoFlav_A103
Culicinae flavivirus PoMoFlav_A126
Culicinae flavivirus PoMoFlav_A128
Culicinae flavivirus PoMoFlav_A136
Culicinae flavivirus PoMoFlav_A153
Culicinae flavivirus PoMoFlav_A155
Culicinae flavivirus PoMoFlav_A163
Culicinae flavivirus PoMoFlav_A91
Culicinae flavivirus PoMoFlav_A95
Flavivirus Aedes/MO-Ac/ITA/2009
Flavivirus Anopheles/PV-Am/ITA/2009
Flavivirus CbaAr4001
Flavivirus FSME
Gadgets Gully virus
Greek goat encephalitis virus
Jugra virus
Kadam virus
Kamiti River virus
Kedougou virus
Montana myotis leukoencephalitis virus
Mosquito flavivirus
Ngoye virus
Nounane virus
Phlebotomus flavivirus Alg_F19
Phlebotomus flavivirus Alg_F8
Quang Binh virus
Russian Spring-Summer encephalitis virus
Sokoluk virus
Spanish sheep encephalitis virus
T’Ho virus
Tai forest virus B31
Tamana bat virus
Tick-borne flavivirus
Wang Thong virus
Flavivirus sp.
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW (2009).
   GenBank. Nucleic Acids Res. 2009 Jan;37(Database issue):D26-31.
   Epub 2008 Oct 21.

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