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torsdag 23 februari 2023

PANGO linjat BA.5.2 ovat lisääntyneet. PANGO-luetteloissa näkyy seuraavat BA.5.2. 49 asti. GITHUB ja tags listoissa on BA.5.2.64 asti.

 https://cov-lineages.org/lineage_list.htm  BA.5.2.49 on viimeinen. Muta GItHUB on  työstänyt jo uudsia designaatioita siten, että  tänään on viimeisin BA.5.2.64 , joten nämä joita ei ole vielä ladattu PANGO-puoelle näkyviin on saatavissa  tgag listoista, joita silloin tällöin päivitetään. Uusimmat  listat ovat   v1.18 ja v1.18.1  Lisäksi GITHUB  open- ja closed- asioista löytyy tietoa.

Lineage Most common countries Earliest date # designated # assigned Description WHO Name
BA.5.2 United States of America 18.0%, Japan 17.0%, Germany 7.0%, United Kingdom 6.0%, Russia 5.0% 2020-07-01 10695 288165 Alias of B.1.1.529.5.2, mainly found in South Africa, England and USA, from pango-designation issue #551
BA.5.2.1 United States of America 38.0%, Japan 11.0%, Germany 6.0%, Canada 5.0%, United Kingdom 5.0% 2020-07-06 14791 281239 Alias of B.1.1.529.5.2.1, mainly found in South Africa, England and USA, from pango-designation issue #657
BA.5.2.2 France 35.0%, United States of America 11.0%, Germany 7.0%, French_Guiana 6.0%, Canada 6.0% 2022-05-02 391 4077 Alias of B.1.1.529.5.2.2, France and Martinique lineage
BA.5.2.3 United Kingdom 26.0%, United States of America 17.0%, Denmark 9.0%, Germany 8.0%, France 6.0% 2022-02-27 594 8282 Alias of B.1.1.529.5.2.3, UK lineage
BA.5.2.4 Australia 54.0%, United States of America 11.0%, New_Zealand 6.0%, United Kingdom 6.0%, Denmark 4.0% 2022-05-15 120 732 Alias of B.1.1.529.5.2.4, Australia lineage
BA.5.2.5 Indonesia 79.0%, Australia 8.0%, France 2.0%, Germany 2.0%, Malaysia 2.0% 2022-06-07 51 164 Alias of B.1.1.529.5.2.5, Indonesia lineage
BA.5.2.6 United States of America 26.0%, Japan 19.0%, Germany 8.0%, United Kingdom 6.0%, Indonesia 5.0% 2022-01-02 65 13393 Alias of B.1.1.529.5.2.6, global lineage, S:R346T, from pango-designation issue #870
BA.5.2.7 United Kingdom 19.0%, Germany 15.0%, Russia 13.0%, United States of America 10.0%, Japan 10.0% 2022-01-26 62 2371 Alias of B.1.1.529.5.2.7, global lineage, from pango-designation issue #924
BA.5.2.8 Israel 25.0%, United States of America 25.0%, Canada 20.0%, Germany 7.0%, United Kingdom 4.0% 2022-04-08 455 1475 Alias of B.1.1.529.5.2.8, Israel lineage
BA.5.2.9 United States of America 67.0%, Mexico 7.0%, Canada 6.0%, United Kingdom 5.0%, Germany 2.0% 2022-02-26 3582 15676 Alias of B.1.1.529.5.2.9, USA lineage
BA.5.2.10 Brazil 77.0%, Croatia 4.0%, United States of America 3.0%, Germany 3.0%, France 2.0% 2022-05-09 201 395 Alias of B.1.1.529.5.2.10, Brazil lineage
BA.5.2.11 Philippines 88.0%, New_Zealand 6.0%, Denmark 3.0%, United States of America 1.0%, Australia 1.0% 2022-06-20 136 174 Alias of B.1.1.529.5.2.11, Philippines lineage
BA.5.2.12 Japan 95.0%, United States of America 1.0%, Germany 1.0%, Russia 1.0%, Spain 0.0% 2022-05-31 700 5500 Alias of B.1.1.529.5.2.12, Japan lineage
BA.5.2.13 United Kingdom 38.0%, United States of America 15.0%, Canada 14.0%, Germany 10.0%, Denmark 7.0% 2022-06-23 69 3202 Alias of B.1.1.529.5.2.13, mainly found in England, from pango-designation issue #959
BA.5.2.14 United States of America 39.0%, Canada 20.0%, Sweden 10.0%, Germany 8.0%, United Kingdom 5.0% 2022-01-09 9 549 Alias of B.1.1.529.5.2.14, mainly found in Denmark, Canada and Pakistan, from pango-designation issue #1002
BA.5.2.16 United States of America 24.0%, Indonesia 16.0%, United Kingdom 6.0%, Russia 5.0%, Australia 5.0% 2022-01-09 681 1937 Alias of B.1.1.529.5.2.16, Indonesia lineage, defined by ORF1a:A3697V, indirectly from pango-designation issue #1065
BA.5.2.18 United States of America 17.0%, Germany 14.0%, Russia 11.0%, United Kingdom 8.0%, Sweden 7.0% 2021-11-01 163 2543 Alias of B.1.1.529.5.2.18, mainly Scandinavia, defined by S:K444R on ORF1b:1050N branch, from pango-designation issue #1025
BA.5.2.19 South_Korea 41.0%, United States of America 26.0%, Japan 9.0%, Indonesia 4.0%, United Kingdom 3.0% 2022-06-14 788 2203 Alias of B.1.1.529.5.2.19, mainly Scandinavia, defined by ORF3a:T14I on ORF1b:1050N branch, from issue #916
BA.5.2.20 United States of America 22.0%, Germany 10.0%, France 8.0%, Japan 7.0%, United Kingdom 7.0% 2020-07-20 1127 19498 Alias of B.1.1.529.5.2.20, mainly Indonesia, defined by C23707T on ORF1b:1050N branch to reduce unspecified BA.5.2
BV.1 United States of America 16.0%, Denmark 16.0%, Germany 14.0%, Slovenia 13.0%, France 8.0% 2022-07-01 33 244 Alias of B.1.1.529.5.2.20.1, mainly found in Denmark, from pango-designation issue #1019, formerly BA.5.2.17
BA.5.2.21 United States of America 52.0%, Japan 7.0%, Canada 7.0%, Germany 6.0%, United Kingdom 5.0% 2022-02-09 816 9525 Alias of B.1.1.529.5.2.21, mainly Indonesia, defined by C5284T on ORF1b:1050N branch to reduce unspecified BA.5.2
BA.5.2.22 United States of America 26.0%, Canada 16.0%, Germany 8.0%, Japan 8.0%, South_Korea 4.0% 2022-04-10 1308 4729 Alias of B.1.1.529.5.2.22, mainly found in USA, Canada and Germany, from pango-designation issue #945
BA.5.2.23 United States of America 55.0%, Costa_Rica 27.0%, Canada 4.0%, United Kingdom 2.0%, Sweden 2.0% 2022-07-04 25 2016 Alias of B.1.1.529.5.2.23, mainly found in USA, from pango-designation issue #1090
BA.5.2.24 United States of America 12.0%, Australia 11.0%, Russia 11.0%, Germany 8.0%, Canada 7.0% 2022-05-28 88 1391 Alias of B.1.1.529.5.2.24, defined by S:K444N on ORF1b:1050N branch
BA.5.2.25 United States of America 21.0%, France 21.0%, Canada 15.0%, Germany 6.0%, Luxembourg 5.0% 2022-07-25 25 1141 Alias of B.1.1.529.5.2.25, mainly found in France, USA and Canada, from pango-designation issue #1111
BA.5.2.26 Japan 21.0%, Germany 17.0%, Thailand 8.0%, United States of America 6.0%, Poland 5.0% 2022-02-20 2011 4655 Alias of B.1.1.529.5.2.26, most common in Thailand, defined by ORF3a:L108V, from pango-designation issue #1133
BA.5.2.27 United States of America 27.0%, Japan 15.0%, Vietnam 6.0%, Russia 6.0%, South_Korea 5.0% 2022-02-09 1377 3599 Alias of B.1.1.529.5.2.27, most common in Vietnam, defined by ORF1a:I2332V, from pango-designation issue #1133
CF.1 United States of America 97.0%, Norway 2.0%, Mexico 2.0% 2022-07-13 6 64 Alias of B.1.1.529.5.2.27.1, US and Mexico lineage, defined by S:K97T, originally designated as BA.5.2.15 from issue #1054
BA.5.2.28 Japan 26.0%, United States of America 24.0%, Malaysia 9.0%, United Kingdom 6.0%, Germany 4.0% 2022-03-22 1957 4342 Alias of B.1.1.529.5.2.28, most common in Malaysia, defined by ORF1a:T1437I, from pango-designation issue #1133
BA.5.2.29 Denmark 69.0%, Sweden 20.0%, Australia 3.0%, United States of America 2.0%, Iran 1.0% 2022-07-21 88 334 Alias of B.1.1.529.5.2.29, mainly found in Denmark, from pango-designation issue #1050
BA.5.2.30 Denmark 30.0%, Germany 22.0%, United States of America 10.0%, Belgium 8.0%, Japan 7.0% 2021-10-24 92 305 Alias of B.1.1.529.5.2.30, Europe lineage, defined by S:G446D
BA.5.2.31 United States of America 85.0%, Canada 3.0%, Japan 2.0%, Israel 1.0%, United Kingdom 1.0% 2022-06-06 599 1543 Alias of B.1.1.529.5.2.31, US lineage, defined by S:L84I
BA.5.2.32 Russia 56.0%, United States of America 13.0%, Canada 11.0%, Germany 6.0%, South_Korea 2.0% 2022-07-26 21 378 Alias of B.1.1.529.5.2.32, Russia lineage, defined by S:N450D
BA.5.2.33 United States of America 21.0%, Australia 13.0%, United Kingdom 10.0%, Japan 9.0%, Russia 8.0% 2020-07-22 599 1626 Alias of B.1.1.529.5.2.33, UK lineage, defined by ORF8:P93S
BA.5.2.34 United States of America 45.0%, Israel 10.0%, Germany 9.0%, Canada 6.0%, United Kingdom 4.0% 2022-01-02 76 4147 Alias of B.1.1.529.5.2.34, mainly found in Israel and USA, from pango-designation issue #992
BA.5.2.35 United Kingdom 40.0%, United States of America 23.0%, Germany 6.0%, Netherlands 4.0%, Canada 3.0% 2022-06-18 252 3190 Alias of B.1.1.529.5.2.35, Pakistan lineage, defined by S:R346T after G28423C and C7006T
BA.5.2.36 United States of America 13.0%, Denmark 11.0%, United Kingdom 10.0%, Indonesia 10.0%, Sweden 8.0% 2022-07-03 38 604 Alias of B.1.1.529.5.2.36, India/Pakistan lineage, defined by S:K444T
BA.5.2.37 United States of America 38.0%, India 10.0%, Canada 10.0%, Germany 10.0%, United Kingdom 10.0% 2022-06-30 49 336 Alias of B.1.1.529.5.2.37, found mainly in USA and India, from pango-designation issue #1117
BA.5.2.38 United States of America 39.0%, Japan 8.0%, Malaysia 7.0%, Russia 7.0%, Australia 7.0% 2022-06-18 41 114 Alias of B.1.1.529.5.2.38, S:T430I
BA.5.2.39 United States of America 82.0%, United Kingdom 8.0%, Germany 4.0%, Switzerland 3.0%, Canada 1.0% 2022-08-18 42 134 Alias of B.1.1.529.5.2.39, USA, S:R346T
BA.5.2.40 Sweden 75.0%, United Kingdom 15.0%, France 5.0%, Luxembourg 5.0% 2022-09-02 15 20 Alias of B.1.1.529.5.2.40, Sweden, S:N450D
BA.5.2.41 Sweden 63.0%, United States of America 17.0%, Denmark 12.0%, Pakistan 4.0%, Russia 2.0% 2022-07-20 41 84 Alias of B.1.1.529.5.2.41, found mainly in Sweden, from pango-designation issue #1328
BA.5.2.42 Australia 84.0%, New_Zealand 14.0%, Indonesia 1.0%, United Kingdom 1.0% 2022-09-12 50 112 Alias of B.1.1.529.5.2.42, found mainly in Australia, from pango-designation issue #1266
BA.5.2.43 South_Korea 51.0%, Japan 44.0%, Mongolia 3.0%, United States of America 1.0%, Singapore 1.0% 2022-09-15 31 670 Alias of B.1.1.529.5.2.43, found mainly in SouthKorea, from pango-designation issue #1312
BA.5.2.44 South_Korea 25.0%, United States of America 12.0%, Russia 10.0%, Indonesia 10.0%, Japan 9.0% 2022-06-04 886 1223 Alias of B.1.1.529.5.2.44, Indonesia/Malaysia/SouthKorea/global, ORF1a:L2564F
BA.5.2.45 New_Zealand 75.0%, Australia 19.0%, United States of America 2.0%, Thailand 2.0%, Germany 1.0% 2022-09-17 19 124 Alias of B.1.1.529.5.2.45, found mainly in Australia, from pango-designation issue #1383
BA.5.2.46 Japan 90.0%, United States of America 3.0%, Greece 3.0%, Germany 1.0%, United Kingdom 1.0% 2022-10-02 21 116 Alias of B.1.1.529.5.2.46 found mainly in Japan, from pango-designation issue #1446
BA.5.2.47 Indonesia 36.0%, United States of America 14.0%, Australia 12.0%, Japan 7.0%, Germany 5.0% 2022-03-10 817 1304 Alias of B.1.1.529.5.2.47 found mainly in Indonesia, Australia, and USA, from pango-designation issue #1496
BA.5.2.48 China 82.0%, Japan 5.0%, South_Korea 4.0%, Singapore 3.0%, United States of America 2.0% 2022-01-10 193 4049 Alias of B.1.1.529.5.2.48, China, C2710T, C8626T, T17208C, from pango-designation issue #1471
BA.5.2.49 China 88.0%, South_Korea 4.0%, Singapore 3.0%, Japan 3.0%, United States of America 1.0% 2022-09-28 66 494 Alias of B.1.1.529.5.2.49, China, S:T883I, A14673G, T16456C, from #1480


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