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söndag 19 februari 2023

Jälleen tullut käyttöön lisää koodinimiä ( EM, EN, EP, EQ, ER) edellisten ( EA, EB, EC, ED, EE, EF, EG, EH, EJ, EK, EL) Käytettyjen koodien luettelo GITHUB lähteestä lisätekstiä

 17.3. 2023  nyt on jo ET.1 saanut  designaation,  se on BQ.1.1.35. Tästä on sitaatti  17.3. 2023 tässä blogissa.

"ET" alias BQ.1.1.35.

10.3. 2023 huomaan"ES" koodin tuleen käyttöön: Klo 19:30 Ruotsin aikaa lisään tämän Githubtiedon:

“ER”, alias BQ.1.1.65.   GITHUB tieto: Sitaatti.  https://github.com/cov-lineages/pango-designation/issues/1722#issuecomment-1461815258

InfrPopGen commented Mar 9, 2023

Thanks for submitting. We've added lineage ES.1 with 62 newly designated sequences, and 44 updated. Defining mutation A21717G (S:Q52R) (following A22002T (S:K147I)).

(Aiempia: )

 (Näkyy lisää koodinimiä , viimeisin ER näissä E-alkuisissa

"EG" alias  "XNN.1.9.2".  EG.1  , XBB.1.9.2 alalinja , jolla on S:Q613H mutaatio.  ( Sitä on 100 designaatiota ja lisäksi  on päivityksiä 32).

"EH"  talias  BA.5.3.1.1.1.1.1.1.28" . “EH”, Alias “BQ.1.1.28” . (BQ.1.1.28 (S:P251L, ORF1b:P976S) Sublineage with S:S247N, S:Y248S (91 seq, Feb 18) #1648  https://github.com/cov-lineages/pango-designation/issues/1648. EH.1 (S:S247N, S:Y248S) from #1648

"EJ" talias   "BA.2.75.5.1.3.8" . .

"EK" alias "XBB.1.5.13" .   EK.1 alias  XBB.1.5.13.1  Github Issue  #1638. EK.1 (XBB.1.5.13.1 with S: K417S). '

  EK.2   Added EK.2 (XBB.1.5.13 with S:T259I) with 80 designations. 

"EL" talias  "XBB.1.5.14"  alalinjaa.   EL.1  alias XBB.1.5.14.1, Spike: Q675H.. GITHUB asia #1631.    https://github.com/cov-lineages/pango-designation/commit/aca49a0bc239d20676f7de786ba8353e65fd0cc0

EM” Alias XBB.1.5.7”Added lineage EM.1 (XBB.1.5.7.1, S:R214L) with 200 designations .

EN” tarkoittaa “BQ.1.1.46” https://github.com/cov-lineages/pango-designation/issues/1696 BQ.1.1.46 sublineage with S:V1264L (>200 seq, mainly in France) #1696. EN.1; Alias BQ.1.1.46.1

EP” tarkoittaa BM.1.1.4, joka on BA.2.75.3 linjan , alias “BM”, alalinja #1676 and EP.2 (S:S1147L, N:G212S).

  “EQ”, alias “BA.5.1.33".  https://github.com/cov-lineages/pango-designation/commit/9530ac7e23ce77c4bd1ffc90ea7a1c6e21d10b54 Added new lineage EQ.1 from #1522 with 8 new sequence designations, and 213 updated from BA.5.1.33

“ER”, alias BQ.1.1.22.  Added new lineage ER.1 from #1429 with 225 new sequence designations, and 10 updated from BQ.1.1.22

 

 

 

19.2. 2023

Tämän listan lisäksi on juuri tullut myös  "XBQ" rekombinantille määrittely. Se on  BA.5.2 ja CJ.1 linjojen keskeinen  rekombinaatio.  Kaikki ne ovat omikron linjoja, joiden aliasnimi  alkaa  kodilla "B.1.1.529" . Tuo on saanut merkinnän "BA". Rekombinaatioissa on  X kirjain. Jos siinä on  rekombinaatio johonkin omikronilinjaan, näkyy merkintä "BA" tai   sitren muu omikroninalalinjamerkintä kirjainyhtymänä, esim "CJ" tai  "BE". Lyhin mahdollinen  ilmaisutapa on käytössä. WHO:n  lehdistökonferenssissa sanottiin, että  pandemiseen koronaan  menehtyy vielä viikottain n 10 000 ihmistä ja jokainen  omikronlinja voi olla tappavaa laatua.

 https://github.com/cov-lineages/pango-designation/releases/tag/v1.18

177 lines (177 sloc) 5.14 KB
{
"A": "",
"B": "",
"C": "B.1.1.1",
"D": "B.1.1.25",
"G": "B.1.258.2",
"K": "B.1.1.277",
"L": "B.1.1.10",
"M": "B.1.1.294",
"N": "B.1.1.33",
"P": "B.1.1.28",
"Q": "B.1.1.7",
"R": "B.1.1.316",
"S": "B.1.1.217",
"U": "B.1.177.60",
"V": "B.1.177.54",
"W": "B.1.177.53",
"Y": "B.1.177.52",
"Z": "B.1.177.50",
"AA": "B.1.177.15",
"AB": "B.1.160.16",
"AC": "B.1.1.405",
"AD": "B.1.1.315",
"AE": "B.1.1.306",
"AF": "B.1.1.305",
"AG": "B.1.1.297",
"AH": "B.1.1.241",
"AJ": "B.1.1.240",
"AK": "B.1.1.232",
"AL": "B.1.1.231",
"AM": "B.1.1.216",
"AN": "B.1.1.200",
"AP": "B.1.1.70",
"AQ": "B.1.1.39",
"AS": "B.1.1.317",
"AT": "B.1.1.370",
"AU": "B.1.466.2",
"AV": "B.1.1.482",
"AW": "B.1.1.464",
"AY": "B.1.617.2",
"AZ": "B.1.1.318",
"BA": "B.1.1.529",  Tämä on omicron!
"BB": "B.1.621.1",
"BC": "B.1.1.529.1.1.1",
"BD": "B.1.1.529.1.17.2",
"BE": "B.1.1.529.5.3.1",
"BF": "B.1.1.529.5.2.1",
"BG": "B.1.1.529.2.12.1",
"BH": "B.1.1.529.2.38.3",
"BJ": "B.1.1.529.2.10.1",
"BK": "B.1.1.529.5.1.10",
"BL": "B.1.1.529.2.75.1",
"BM": "B.1.1.529.2.75.3",
"BN": "B.1.1.529.2.75.5",
"BP": "B.1.1.529.2.3.16",
"BQ": "B.1.1.529.5.3.1.1.1.1",
"BR": "B.1.1.529.2.75.4",
"BS": "B.1.1.529.2.3.2",
"BT": "B.1.1.529.5.1.21",
"BU": "B.1.1.529.5.2.16",
"BV": "B.1.1.529.5.2.20",
"BW": "B.1.1.529.5.6.2",
"BY": "B.1.1.529.2.75.6",
"BZ": "B.1.1.529.5.2.3",
"CA": "B.1.1.529.2.75.2",
"CB": "B.1.1.529.2.75.9",
"CC": "B.1.1.529.5.3.1.1.1.2",
"CD": "B.1.1.529.5.2.31",
"CE": "B.1.1.529.5.2.33",
"CF": "B.1.1.529.5.2.27",
"CG": "B.1.1.529.5.2.26",
"CH": "B.1.1.529.2.75.3.4.1.1",
"CJ": "B.1.1.529.2.75.3.1.1.1",
"CK": "B.1.1.529.5.2.24",
"CL": "B.1.1.529.5.1.29",
"CM": "B.1.1.529.2.3.20",
"CN": "B.1.1.529.5.2.21",
"CP": "B.1.1.529.5.2.6",
"CQ": "B.1.1.529.5.3.1.4.1.1",
"CR": "B.1.1.529.5.2.18",
"CS": "B.1.1.529.4.1.10",
"CT": "B.1.1.529.5.2.36",
"CU": "B.1.1.529.5.1.26",
"CV": "B.1.1.529.2.75.3.1.1.3",
"CW": "B.1.1.529.5.3.1.1.1.1.1.1.14",
"CY": "B.1.1.529.5.2.7",
"CZ": "B.1.1.529.5.3.1.1.1.1.1.1.1",
"DA": "B.1.1.529.5.2.38",
"DB": "B.1.1.529.5.2.25",
"DC": "B.1.1.529.4.6.5",
"DD": "B.1.1.529.2.3.21",
"DE": "B.1.1.529.5.1.23",
"DF": "B.1.1.529.5.10.1",
"DG": "B.1.1.529.5.2.24.2.1.1",
"DH": "B.1.1.529.5.1.22",
"DJ": "B.1.1.529.5.1.25",
"DK": "B.1.1.529.5.3.1.1.1.1.1.1.7",
"DL": "B.1.1.529.5.1.15",
"DM": "B.1.1.529.5.3.1.1.1.1.1.1.15",
"DN": "B.1.1.529.5.3.1.1.1.1.1.1.5",
"DP": "B.1.1.529.5.3.1.1.1.1.1.1.8",
"DQ": "B.1.1.529.5.2.47",
"DR": "B.1.1.529.5.3.1.1.1.1.1.1.3",
"DS": "B.1.1.529.2.75.5.1.3.1",
"DT": "B.1.1.529.5.3.1.1.1.1.1.1.32",
"DU": "B.1.1.529.5.3.1.1.1.1.1.1.2",
"DV": "B.1.1.529.2.75.3.4.1.1.1.1.1",
"DW": "B.1.1.529.5.3.1.1.2.1",
"DY": "B.1.1.529.5.2.48",
"DZ": "B.1.1.529.5.2.49",
"EA": "B.1.1.529.5.3.1.1.1.1.1.1.52",
"EB": "B.1.1.529.5.1.55",
"EC": "B.1.1.529.5.3.1.1.1.1.1.10.1",
"ED": "B.1.1.529.5.3.1.1.1.1.1.1.18",
"EE": "B.1.1.529.5.3.1.1.1.1.1.1.4",
"EF": "B.1.1.529.5.3.1.1.1.1.1.1.13",
"XA": ["B.1.1.7","B.1.177"],
"XB": ["B.1.634","B.1.631"],
"XC": ["AY.29","B.1.1.7"],
"XD": ["B.1.617.2*","BA.1*"],
"XE": ["BA.1*","BA.2*"],
"XF": ["B.1.617.2*","BA.1*"],
"XG": ["BA.1*","BA.2*"],
"XH": ["BA.1*","BA.2*"],
"XJ": ["BA.1*","BA.2*"],
"XK": ["BA.1*","BA.2*"],
"XL": ["BA.1*","BA.2*"],
"XM": ["BA.1.1*","BA.2*"],
"XN": ["BA.1*","BA.2*"],
"XP": ["BA.1.1*","BA.2*"],
"XQ": ["BA.1.1*","BA.2*"],
"XR": ["BA.1.1*","BA.2*"],
"XS": ["B.1.617.2*","BA.1.1*"],
"XT": ["BA.2*","BA.1*"],
"XU": ["BA.1*","BA.2*"],
"XV": ["BA.1*","BA.2*"],
"XW": ["BA.1*","BA.2*"],
"XY": ["BA.1*","BA.2*"],
"XZ": ["BA.2*","BA.1*"],
"XAA": ["BA.1*","BA.2*"],
"XAB": ["BA.1*","BA.2*"],
"XAC": ["BA.2*","BA.1*","BA.2*"],
"XAD": ["BA.2*","BA.1*"],
"XAE": ["BA.2*","BA.1*"],
"XAF": ["BA.1*","BA.2*"],
"XAG": ["BA.1*","BA.2*"],
"XAH": ["BA.2*","BA.1*"],
"XAJ": ["BA.2.12.1*","BA.4*"],
"XAK": ["BA.2*","BA.1*","BA.2*"],
"XAL": ["BA.1*","BA.2*"],
"XAM": ["BA.1.1","BA.2.9"],
"XAN": ["BA.2*","BA.5.1"],
"XAP": ["BA.2*","BA.1*"],
"XAQ": ["BA.1*","BA.2*"],
"XAR": ["BA.1*","BA.2*"],
"XAS": ["BA.5*","BA.2*"],
"XAT": ["BA.2.3.13","BA.1*"],
"XAU": ["BA.1.1*","BA.2.9*"],
"XAV": ["BA.2*","BA.5*"],
"XAW": ["BA.2*","AY.122"],
"XAY": ["AY.45","BA.4/5*"],
"XAZ": ["BA.2.5","BA.5","BA.2.5"],
"XBA": ["AY.45","BA.4/5"],
"XBB": ["BJ.1","BM.1.1.1"],
"XBC": ["BA.2*","B.1.617.2*","BA.2*","B.1.617.2*"],
"XBD": ["BA.2.75.2","BF.5"],
"XBE": ["BA.5.2","BE.4.1"],
"XBF": ["BA.5.2.3","CJ.1"],
"XBG": ["BA.2.76","BA.5.2"],
"XBH": ["BA.2.3.17","BA.2.75.2"],
"XBJ": ["BA.2.3.20","BA.5.2"],
"XBK": ["BA.5.2","CJ.1"],
"XBL": ["XBB.1","BA.2.75","XBB.1"],
"XBM": ["BA.2.76","BF.3"],
"XBN": ["BA.2.75","XBB.3"],
"XBP": ["BA.2.75*","BQ.1*"]
}

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