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måndag 16 januari 2023

Sars-CoV-2 , BA.5 linjat PANGO luetteloista

https://github.com/cov-lineages/pango-designation/blob/master/lineage_notes.txt


BA.5 Alias of B.1.1.529.5, from pango-designation issue #517

BA.5.1 Alias of B.1.1.529.5.1, Portugal lineage

BA.5.1.1 Alias of B.1.1.529.5.1.1, USA lineage

BA.5.1.2 Alias of B.1.1.529.5.1.2, mainly found in Denmark, Portugal and Luxembourg, from pango-designation issue #790

BA.5.1.3 Alias of B.1.1.529.5.1.3, mainly found in Germany Portugal and Spain, from pango-designation issue #765

BA.5.1.4 Alias of B.1.1.529.5.1.4, mainly found in Denmark and England, from pango-designation issue #801

BA.5.1.5 Alias of B.1.1.529.5.1.5, mainly found in UK, Denmark, and Belgium, from pango-designation issue #835

BA.5.1.6 Alias of B.1.1.529.5.1.6, Mexico lineage

BA.5.1.7 Alias of B.1.1.529.5.1.7, Canada lineage

BA.5.1.8 Alias of B.1.1.529.5.1.8, Peru lineage

BA.5.1.9 Alias of B.1.1.529.5.1.9, mainly found in England, Luxembourg, Scotland and Ireland from pango-designation issue #786

BA.5.1.10 Alias of B.1.1.529.5.1.10, mainly found in USA, Italy and England, from pango-designation issue #901

BK.1 Alias of B.1.1.529.5.1.10.1, mainly found in USA, and Canada, from pango-designation issue #901

BA.5.1.11 Alias of B.1.1.529.5.1.11, mainly found in Denmark, from pango-designation issue #908

BA.5.1.12 Alias of B.1.1.529.5.1.12, mainly found in Spain, from pango-designation issue #902

BA.5.1.14 Alias of B.1.1.529.5.1.14, mainly found in Brazil

BA.5.1.15 Alias of B.1.1.529.5.1.15, Peru and Brazil lineage

DL.1 Alias of B.1.1.529.5.1.15.1, found mainly in Brazil and USA, from pango-designation issue #1376

BA.5.1.16 Alias of B.1.1.529.5.1.16, Japan lineage

BA.5.1.17 Alias of B.1.1.529.5.1.17, France lineage

BA.5.1.18 Alias of B.1.1.529.5.1.18, mainly found in USA, from pango-designation issue #930

BA.5.1.19 Alias of B.1.1.529.5.1.19, mainly found in Netherlands, Germany, USA, and England, from pango-designation issue #999

BA.5.1.20 Alias of B.1.1.529.5.1.20, mainly found in USA and Belgium, from pango-designation issue #1000

BA.5.1.21 Alias of B.1.1.529.5.1.21, mainly found in Gambia and Japan, from pango-designation issue #958

BT.1 Alias of B.1.1.529.5.1.21.1, mainly found in Japan, from pango-designation issue #958

BT.2 Alias of B.1.1.529.5.1.21.2, mainly found in Denmark, Germany and France, from pango-designation issue #1192

BA.5.1.22 Alias of B.1.1.529.5.1.22, mainly found in Europe, defined by ORF1b:S1273L, from pango-designation issue #1135

DH.1 Alias of B.1.1.529.5.1.22.1, found mainly in Denmark, from pango-designation issue #1242

BA.5.1.23 Alias of B.1.1.529.5.1.23, mainly found in Spain, defined by ORF1a:S302F, from pango-designation issue #1135

DE.1 Alias of B.1.1.529.5.1.23.1, S:A694V

DE.2 Alias of B.1.1.529.5.1.23.2, S:R346T, S:G181V

BA.5.1.24 Alias of B.1.1.529.5.1.24, mainly found in Finland, defined by ORF1b:V1271L, from pango-designation issue #1135

BA.5.1.25 Alias of B.1.1.529.5.1.25, mainly found in Mexico and Peru, defined by ORF7b:H42Y, from pango-designation issue #1135

DJ.1 Alias of B.1.1.529.5.1.25.1, found mainly in Peru, from pango-designation issue #1245

DJ.1.1 Alias of B.1.1.529.5.1.25.1.1, found in Peru, from pango-designation issue #1245

DJ.1.2 Alias of B.1.1.529.5.1.25.1.2, found mainly in Peru, from pango-designation issue #1379

DJ.1.3 Alias of B.1.1.529.5.1.25.1.3 found mainly in Peru, Colombia and USA, from pango-designation issue #1409

BA.5.1.26 Alias of B.1.1.529.5.1.26, mainly found in Czechia, defined by S:R346T

CU.1 Alias of B.1.1.529.5.1.26.1, Central/Eastern Europe, S:T95I, S:T547K

BA.5.1.27 Alias of B.1.1.529.5.1.27, mainly found in North America, defined by S:R346T

BA.5.1.28 Alias of B.1.1.529.5.1.28, mainly found in North America, defined by S:R346T (and A18480G)

BA.5.1.29 Alias of B.1.1.529.5.1.29, mainly found in Russia, Germany and Estonia, from pango-designation issue #1060

CL.1 Alias of B.1.1.529.5.1.29.1, S:150E and S:460K, issue #1187

BA.5.1.30 Alias of B.1.1.529.5.1.30, ORF6:D6G

BA.5.1.31 Alias of B.1.1.529.5.1.31, found mainly in France and Denmark, from pango-designation issue #991

BA.5.2 Alias of B.1.1.529.5.2, mainly found in South Africa, England and USA, from pango-designation issue #551

BA.5.2.1 Alias of B.1.1.529.5.2.1, mainly found in South Africa, England and USA, from pango-designation issue #657

BF.1 Alias of B.1.1.529.5.2.1.1, mainly found in England, Denmark, Spain and Scotland, from pango-designation issue #618

BF.1.1 Alias of B.1.1.529.5.2.1.1.1, USA lineage

BF.2 Alias of B.1.1.529.5.2.1.2, Denmark lineage

BF.3 Alias of B.1.1.529.5.2.1.3, India lineage

BF.3.1 Alias of B.1.1.529.5.2.1.3.1, mainly found India, Singapore, and USA, from pango-designation issue #825

BF.4 Alias of B.1.1.529.5.2.1.4, mainly found in England, from pango-designation issue #788

BF.5 Alias of B.1.1.529.5.2.1.5, Israel lineage

BF.5.1 Alias of B.1.1.529.5.2.1.5.1 found mainly in Japan and Israel, from pango-designation issue #1475

BF.5.2 Alias of B.1.1.529.5.2.1.5.2 found mainly in Japan, from pango-designation issue #1476

BF.6 Alias of B.1.1.529.5.2.1.6, mainly found in England and Scotland, from pango-designation issue #821

BF.7 Alias of B.1.1.529.5.2.1.7, mainly found in Belgium, England and Denmark, from pango-designation issue #827

BF.7.1 Alias of B.1.1.529.5.2.1.7.1, mainly found in Germany, S:G261V, from pango-designation issue #1132

BF.7.2 Alias of B.1.1.529.5.2.1.7.2, Denmark, S:H1101Y and S:V486I, issue #1216

BF.7.3 Alias of B.1.1.529.5.2.1.7.3, France/Czechia, S:K182E

BF.7.4 Alias of B.1.1.529.5.2.1.7.4, Europe, ORF8:H17Y

BF.7.4.1 Alias of B.1.1.529.5.2.1.7.4.1, found mainly in USA and Netherlands, from pango-designation issue #1253

BF.7.4.2 Alias of B.1.1.529.5.2.1.7.4.2, Europe

BF.7.5 Alias of B.1.1.529.5.2.1.7.5, Europe, ORF1b:P1427L

BF.7.5.1 Alias of B.1.1.529.5.2.1.7.5.1, found mainly in Germany and Denmark, from pango-designation issue #1317

BF.7.6 Alias of B.1.1.529.5.2.1.7.6, Europe, ORF3a:E239D

BF.7.7 Alias of B.1.1.529.5.2.1.7.7, Europe, S:D80G

BF.7.8 Alias of B.1.1.529.5.2.1.7.8, Europe, S:T883I

BF.7.9 Alias of B.1.1.529.5.2.1.7.9, Europe, S:Q677H

BF.7.10 Alias of B.1.1.529.5.2.1.7.10, Europe, S:Q1201K

BF.7.11 Alias of B.1.1.529.5.2.1.7.11, Europe, S:D1260Y

BF.7.12 Alias of B.1.1.529.5.2.1.7.12, Europe, S:A942S

BF.7.13 Alias of B.1.1.529.5.2.1.7.13, Belgium, ORF1a:H388Y, ORF1a:H1160Y,

BF.7.13.1 Alias of B.1.1.529.5.2.1.7.13.1, Europe, S:T430I, S:P681Y

BF.7.13.2 Alias of B.1.1.529.5.2.1.7.13.2, Poland, S:A653V

BF.7.14 Alias of B.1.1.529.5.2.1.7.14, China, S:C1243F, from issue #1470

BF.7.15 Alias of B.1.1.529.5.2.1.7.15, Japan, S:G257D & ORF1a:A1812V, from issue #1358

BF.8 Alias of B.1.1.529.5.2.1.8, USA lineage

BF.9 Alias of B.1.1.529.5.2.1.9, Canada lineage

BF.10 Alias of B.1.1.529.5.2.1.10, USA lineage

BF.10.1 Alias of B.1.1.529.5.2.1.10.1, found mainly in USA and Mexico, from pango-designation issue #1442

BF.11 Alias of B.1.1.529.5.2.1.11, mainly found in England, S:R346T, from pango-designation issue #837

BF.11.1 Alias of B.1.1.529.5.2.1.11.1, England, S:S1252F

BF.11.2 Alias of B.1.1.529.5.2.1.11.2, Wales, S:K147N

BF.11.3 Alias of B.1.1.529.5.2.1.11.3, ORF1a:L122F

BF.11.4 Alias of B.1.1.529.5.2.1.11.4, England, S:S704L

BF.11.5 Alias of B.1.1.529.5.2.1.11.5, England, ORF8:I121L

BF.12 Alias of B.1.1.529.5.2.1.12, mainly found Austria, Brazil, and England, from pango-designation issue #752

BF.13 Alias of B.1.1.529.5.2.1.13, mainly found in USA, from pango-designation issue #883

BF.14 Alias of B.1.1.529.5.2.1.14, mainly found in Austria, from pango-designation issue #843

BF.15 Alias of B.1.1.529.5.2.1.15, Sri Lanka lineage, from pango-designation issue #893

BF.16 Alias of B.1.1.529.5.2.1.16, found in USA, from pango-designation issue #942

BF.17 Alias of B.1.1.529.5.2.1.17, Australia lineage

BF.18 Alias of B.1.1.529.5.2.1.18, Australia lineage

BF.19 Alias of B.1.1.529.5.2.1.19, Greece lineage

BF.20 Alias of B.1.1.529.5.2.1.20, lineage in Kenya and other countries

BF.21 Alias of B.1.1.529.5.2.1.21, USA lineage

BF.22 Alias of B.1.1.529.5.2.1.22, mainly found in Japan, from pango-designation issue #1010

BF.23 Alias of B.1.1.529.5.2.1.23, mainly found in Czechia, from pango-designation issue #1036

BF.24 Alias of B.1.1.529.5.2.1.24, mainly found in Indonesia, defined by ORF1a:G683C on S:1020S branch

BF.25 Alias of B.1.1.529.5.2.1.25, USA lineage, defined by S:445A and C18657T

BF.26 Alias of B.1.1.529.5.2.1.26, North America lineage, defined by ORF1b:G376S, issue #1142

BF.27 Alias of B.1.1.529.5.2.1.27, Singapore lineage, defined by ORF1a:A2784V, issue #1140

BF.28 Alias of B.1.1.529.5.2.1.28, Singapore lineage, defined by ORF1a:Q44L, issue #1141

BF.29 Alias of B.1.1.529.5.2.1.29, mainly found in Denmark and USA, from pango-designation issue #1162

BF.30 Alias of B.1.1.529.5.2.1.30, South Africa/England, defined by S:R346T after C25916T, C14599T

BF.31 Alias of B.1.1.529.5.2.1.31, Chile, 23758T

BF.31.1 Alias of B.1.1.529.5.2.1.31.1, Chile, S:A701V and S:S247N/S:Y248-

BF.32 Alias of B.1.1.529.5.2.1.32, found mainly in USA, from pango-designation issue #1250

BF.33 Alias of B.1.1.529.5.2.1.33, Brazil/France, S:R346I, S:N460K

BF.34 Alias of B.1.1.529.5.2.1.34, found mainly in UK and Canada, from pango-designation issue #1233

BA.5.2.2 Alias of B.1.1.529.5.2.2, France and Martinique lineage

BA.5.2.3 Alias of B.1.1.529.5.2.3, UK lineage

BZ.1 Alias of B.1.1.529.5.2.3.1, Denmark lineage, defined by S:Q677H

BA.5.2.4 Alias of B.1.1.529.5.2.4, Australia lineage

BA.5.2.5 Alias of B.1.1.529.5.2.5, Indonesia lineage

BA.5.2.6 Alias of B.1.1.529.5.2.6, global lineage, S:R346T, from pango-designation issue #870

CP.1 Alias of B.1.1.529.5.2.6.1, global lineage, 27360C

CP.1.1 Alias of B.1.1.529.5.2.6.1.1, Portugal, France, Denmark, UK lineage, S:V445A

CP.1.2 Alias of B.1.1.529.5.2.6.1.2, England, S:K150N

CP.1.3 Alias of B.1.1.529.5.2.6.1.3, England, S:G446S

CP.2 Alias of B.1.1.529.5.2.6.2, Bangladesh, S:N334K

CP.3 Alias of B.1.1.529.5.2.6.3, Turkey, S:N460Y

CP.4 Alias of B.1.1.529.5.2.6.4, Turkey, S:I770V

CP.5 Alias of B.1.1.529.5.2.6.5, South Africa, S:C1247F

CP.6 Alias of B.1.1.529.5.2.6.6, S:V1264L

BA.5.2.7 Alias of B.1.1.529.5.2.7, global lineage, from pango-designation issue #924

CY.1 Alias of B.1.1.529.5.2.7.1, found mainly in Belgium, Netherlands and Luxembourg, from pango-designation issue #1247

BA.5.2.8 Alias of B.1.1.529.5.2.8, Israel lineage

BA.5.2.9 Alias of B.1.1.529.5.2.9, USA lineage

BA.5.2.10 Alias of B.1.1.529.5.2.10, Brazil lineage

BA.5.2.11 Alias of B.1.1.529.5.2.11, Philippines lineage

BA.5.2.12 Alias of B.1.1.529.5.2.12, Japan lineage

BA.5.2.13 Alias of B.1.1.529.5.2.13, mainly found in England, from pango-designation issue #959

BA.5.2.14 Alias of B.1.1.529.5.2.14, mainly found in Denmark, Canada and Pakistan, from pango-designation issue #1002

BA.5.2.16 Alias of B.1.1.529.5.2.16, Indonesia lineage, defined by ORF1a:A3697V, indirectly from pango-designation issue #1065

BU.1 Alias of B.1.1.529.5.2.16.1, defined by S:444M and S:460K, from pango-designation issue #1065

BU.2 Alias of B.1.1.529.5.2.16.2, USA lineage, S:V445A

BU.3 Alias of B.1.1.529.5.2.16.3, Guatemala, S:K147N, S:N450D

BA.5.2.18 Alias of B.1.1.529.5.2.18, mainly Scandinavia, defined by S:K444R on ORF1b:1050N branch, from pango-designation issue #1025

CR.1 Alias of B.1.1.529.5.2.18.1, global, S:R346T

CR.1.1 Alias of B.1.1.529.5.2.18.1.1, S:V62I

CR.1.2 Alias of B.1.1.529.5.2.18.1.2, Canada/Israel, S:V445A

CR.1.3 Alias of B.1.1.529.5.2.18.1.3, found mainly in Denmark and Japan, from pango-designation issue #1355

CR.2 Alias of B.1.1.529.5.2.18.2, England, S:Y145H

BA.5.2.19 Alias of B.1.1.529.5.2.19, mainly Scandinavia, defined by ORF3a:T14I on ORF1b:1050N branch, from issue #916

BA.5.2.20 Alias of B.1.1.529.5.2.20, mainly Indonesia, defined by C23707T on ORF1b:1050N branch to reduce unspecified BA.5.2

BV.1 Alias of B.1.1.529.5.2.20.1, mainly found in Denmark, from pango-designation issue #1019, formerly BA.5.2.17

BV.2 Alias of B.1.1.529.5.2.20.2, defined by S:K444N

BA.5.2.21 Alias of B.1.1.529.5.2.21, mainly Indonesia, defined by C5284T on ORF1b:1050N branch to reduce unspecified BA.5.2

CN.1 Alias of B.1.1.529.5.2.21.1, S:N450D, issue #1108

CN.2 Alias of B.1.1.529.5.2.21.2, S:R346T, S:Y28H, USA/Canada, from #1404

BA.5.2.22 Alias of B.1.1.529.5.2.22, mainly found in USA, Canada and Germany, from pango-designation issue #945

BA.5.2.23 Alias of B.1.1.529.5.2.23, mainly found in USA, from pango-designation issue #1090

BA.5.2.24 Alias of B.1.1.529.5.2.24, defined by S:K444N on ORF1b:1050N branch

CK.1 Alias of B.1.1.529.5.2.24.1, Pakistan, defined by S:N460K, issue #1120

CK.1.1 Alias of B.1.1.529.5.2.24.1.1, found mainly in Japan, from pango-designation issue #1452

CK.1.2 Alias of B.1.1.529.5.2.24.1.2, Pakistan, S:G181V, S:R346T, from issue #1467

CK.2 Alias of B.1.1.529.5.2.24.2, Pakistan, defined by E:V62F

CK.2.1 Alias of B.1.1.529.5.2.24.2.1, Pakistan, defined by S:N460K

CK.2.1.1 Alias of B.1.1.529.5.2.24.2.1.1, defined by S:S255F

CK.3 Alias of B.1.1.529.5.2.24.3, found mainly in Singapore and USA, from pango-designation issue #1121

DG.1 Alias of B.1.1.529.5.2.24.2.1.1.1, defined by S:G252S

BA.5.2.25 Alias of B.1.1.529.5.2.25, mainly found in France, USA and Canada, from pango-designation issue #1111

DB.1 Alias of B.1.1.529.5.2.25.1, France/Netherlands/Spain, S:R346T, S:N460K

DB.2 Alias of B.1.1.529.5.2.25.2, BeNeLux, S:A262S

BA.5.2.26 Alias of B.1.1.529.5.2.26, most common in Thailand, defined by ORF3a:L108V, from pango-designation issue #1133

BA.5.2.27 Alias of B.1.1.529.5.2.27, most common in Vietnam, defined by ORF1a:I2332V, from pango-designation issue #1133

CF.1 Alias of B.1.1.529.5.2.27.1, US and Mexico lineage, defined by S:K97T, originally designated as BA.5.2.15 from issue #1054

CG.1 Alias of B.1.1.529.5.2.26.1, mainly found in Germany, Poland and Denmark, from pango-designation issue #1126

BA.5.2.28 Alias of B.1.1.529.5.2.28, most common in Malaysia, defined by ORF1a:T1437I, from pango-designation issue #1133

BA.5.2.29 Alias of B.1.1.529.5.2.29, mainly found in Denmark, from pango-designation issue #1050

BA.5.2.30 Alias of B.1.1.529.5.2.30, Europe lineage, defined by S:G446D

BA.5.2.31 Alias of B.1.1.529.5.2.31, US lineage, defined by S:L84I

CD.1 Alias of B.1.1.529.5.2.31.1, US lineage, defined by S:G446D, S:A688T

CD.2 Alias of B.1.1.529.5.2.31.2, US lineage, defined by S:A435S

BA.5.2.32 Alias of B.1.1.529.5.2.32, Russia lineage, defined by S:N450D

BA.5.2.33 Alias of B.1.1.529.5.2.33, UK lineage, defined by ORF8:P93S

CE.1 Alias of B.1.1.529.5.2.33.1, UK lineage, defined by S:R346I

BA.5.2.34 Alias of B.1.1.529.5.2.34, mainly found in Israel and USA, from pango-designation issue #992

BA.5.2.35 Alias of B.1.1.529.5.2.35, Pakistan lineage, defined by S:R346T after G28423C and C7006T

BA.5.2.36 Alias of B.1.1.529.5.2.36, India/Pakistan lineage, defined by S:K444T

CT.1 Alias of B.1.1.529.5.2.36.1, India/Pakistan lineage, defined by S:K356T

BA.5.2.37 Alias of B.1.1.529.5.2.37, found mainly in USA and India, from pango-designation issue #1117

BA.5.2.38 Alias of B.1.1.529.5.2.38, S:T430I

DA.1 Alias of B.1.1.529.5.2.38.1, Indonesia, S:R346T

BA.5.2.39 Alias of B.1.1.529.5.2.39, USA, S:R346T

BA.5.2.40 Alias of B.1.1.529.5.2.40, Sweden, S:N450D

BA.5.2.41 Alias of B.1.1.529.5.2.41, found mainly in Sweden, from pango-designation issue #1328

BA.5.2.42 Alias of B.1.1.529.5.2.42, found mainly in Australia, from pango-designation issue #1266

BA.5.2.43 Alias of B.1.1.529.5.2.43, found mainly in SouthKorea, from pango-designation issue #1312

BA.5.2.44 Alias of B.1.1.529.5.2.44, Indonesia/Malaysia/SouthKorea/global, ORF1a:L2564F

BA.5.2.45 Alias of B.1.1.529.5.2.45, found mainly in Australia, from pango-designation issue #1383

BA.5.2.46 Alias of B.1.1.529.5.2.46 found mainly in Japan, from pango-designation issue #1446

BA.5.2.47 Alias of B.1.1.529.5.2.47 found mainly in Indonesia, Australia, and USA, from pango-designation issue #1496

DQ.1 Alias of B.1.1.529.5.2.47.1 found mainly in Indonesia, Germany, and USA, from pango-designation issue #1496

BA.5.2.48 Alias of B.1.1.529.5.2.48, China, C2710T, C8626T, T17208C, from pango-designation issue #1471

BA.5.2.49 Alias of B.1.1.529.5.2.49, China, S:T883I, A14673G, T16456C, from #1480

BA.5.3 Alias of B.1.1.529.5.3, mainly found in Germany and South Africa, from pango-designation issue #550

BA.5.3.1 Alias of B.1.1.529.5.3.1, mainly found in South Africa, Austria, and England, from pango-designation issue #625

BE.1 Alias of B.1.1.529.5.3.1.1, mainly found in South Africa, Austria and England, from pango-designation issue #625

BE.1.1 Alias of B.1.1.529.5.3.1.1.1, Germany lineage

BE.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1, found globally, from pango-designation issue #931

BQ.1 Alias of B.1.1.529.5.3.1.1.1.1.1, Nigeria lineage, from pango-designation issue #993

BQ.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1, found globally, defining mutations ORF1b:N1191S and S:R346T, from issue #993

BQ.1.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.1, Europe, ORF1b:V1639A

CZ.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.1.1, England/SouthKorea/Romania, S:F490I

BQ.1.1.2 Alias of B.1.1.529.5.3.1.1.1.1.1.1.2, England, S:D253G, from issue #1209

DU.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.2.1 found mainly in UK, from pango-designation issue #1540

BQ.1.1.3 Alias of B.1.1.529.5.3.1.1.1.1.1.1.3, England, A15111G

DR.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.3.1, found mainly in USA, from pango-designation issue #1420

BQ.1.1.4 Alias of B.1.1.529.5.3.1.1.1.1.1.1.4, T29173C

BQ.1.1.5 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5, ORF1b:P2313L, ORF1a:V3855I

DN.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5.1, S:K147N

DN.1.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.5.1.1 found mainly in UK and Denmark, from pango-designation issue #1463

BQ.1.1.6 Alias of B.1.1.529.5.3.1.1.1.1.1.1.6, ORF1a:L681F

BQ.1.1.7 Alias of B.1.1.529.5.3.1.1.1.1.1.1.7, ORF1a:S216Y

DK.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.7.1, S:339N, ORF1a:A1809T

BQ.1.1.8 Alias of B.1.1.529.5.3.1.1.1.1.1.1.8, ORF1a:H374Y, ORF1a:L969F

DP.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.8.1, S:A352S, England/Belgium

BQ.1.1.9 Alias of B.1.1.529.5.3.1.1.1.1.1.1.9, S:S151I

BQ.1.1.10 Alias of B.1.1.529.5.3.1.1.1.1.1.1.10, S:Y144-, T16413C, Denmark/Germany

BQ.1.1.11 Alias of B.1.1.529.5.3.1.1.1.1.1.1.11, S:S494P

BQ.1.1.12 Alias of B.1.1.529.5.3.1.1.1.1.1.1.12, France/US, S:S494P, on ORF1a:T4368I branch

BQ.1.1.13 Alias of B.1.1.529.5.3.1.1.1.1.1.1.13, Denmark/Israel/Switzerland/France, E:V62F and S:Y144-

BQ.1.1.14 Alias of B.1.1.529.5.3.1.1.1.1.1.1.14, England, G23608T

CW.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.14.1, England, S:G446S

BQ.1.1.15 Alias of B.1.1.529.5.3.1.1.1.1.1.1.15, Spain, T18897C

DM.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.15.1, Spain/Europe/US, S:A348S

BQ.1.1.16 Alias of B.1.1.529.5.3.1.1.1.1.1.1.16, England, S:Q607H

BQ.1.1.17 Alias of B.1.1.529.5.3.1.1.1.1.1.1.17, France, ORF1a:S2273F

BQ.1.1.18 Alias of B.1.1.529.5.3.1.1.1.1.1.1.18, France, C6541T

BQ.1.1.19 Alias of B.1.1.529.5.3.1.1.1.1.1.1.19, England, N:Q380H

BQ.1.1.20 Alias of B.1.1.529.5.3.1.1.1.1.1.1.20, Denmark, S:144- and ORF3a:H204Y

BQ.1.1.21 Alias of B.1.1.529.5.3.1.1.1.1.1.1.21, Switzerland/France, S:144- and A17946G

BQ.1.1.22 Alias of B.1.1.529.5.3.1.1.1.1.1.1.22, Australia/England/Denmark, S:144- and C913A

BQ.1.1.23 Alias of B.1.1.529.5.3.1.1.1.1.1.1.23, France, ORF3a:V97I, S:Y144-, on G6421T branch

BQ.1.1.24 Alias of B.1.1.529.5.3.1.1.1.1.1.1.24, England, 11941T, S:Y144-

BQ.1.1.25 Alias of B.1.1.529.5.3.1.1.1.1.1.1.25, USA/Canada, S:F490S and S:Y144-, from issue #1350

BQ.1.1.26 Alias of B.1.1.529.5.3.1.1.1.1.1.1.26, S:E471Q

BQ.1.1.27 Alias of B.1.1.529.5.3.1.1.1.1.1.1.27, France/USA, S:G181R, ORF1a:F2864L, on G6421T branch

BQ.1.1.28 Alias of B.1.1.529.5.3.1.1.1.1.1.1.28, S:P251L, ORF1b:P976S, on C18828T branch

BQ.1.1.29 Alias of B.1.1.529.5.3.1.1.1.1.1.1.29, S:Q613H

BQ.1.1.30 Alias of B.1.1.529.5.3.1.1.1.1.1.1.30, Canada, S:V445A

BQ.1.1.31 Alias of B.1.1.529.5.3.1.1.1.1.1.1.31, Indonesia/global, S:S256L

BQ.1.1.32 Alias of B.1.1.529.5.3.1.1.1.1.1.1.32 found mainly in USA, S:153I, S:144-, from pango-designation issue #1402

DT.1 Alias of B.1.1.529.5.3.1.1.1.1.1.1.32.1 England, S:F494P, from issue #1484

BQ.1.1.34 Alias of B.1.1.529.5.3.1.1.1.1.1.1.34, England, S:144-, S:494P, from issue #1483

BQ.1.1.35 Alias of B.1.1.529.5.3.1.1.1.1.1.1.35, Canada, S:K147E, ORF1a:A1812T

BQ.1.1.36 Alias of B.1.1.529.5.3.1.1.1.1.1.1.36, Brazil, S:T883I

BQ.1.2 Alias of B.1.1.529.5.3.1.1.1.1.1.2, found globally, defined by S:I666V, from issue #1082

BQ.1.3 Alias of B.1.1.529.5.3.1.1.1.1.1.3, found globally, defined by S:E619Q, from issue #1082

BQ.1.4 Alias of B.1.1.529.5.3.1.1.1.1.1.4, England and Denmark, defined by S:R190T

BQ.1.5 Alias of B.1.1.529.5.3.1.1.1.1.1.5, defined by ORF1b:T1076I

BQ.1.6 Alias of B.1.1.529.5.3.1.1.1.1.1.6, US lineage, defined by ORF1a:G94C

BQ.1.7 Alias of B.1.1.529.5.3.1.1.1.1.1.7, defined by S:L54F

BQ.1.8 Alias of B.1.1.529.5.3.1.1.1.1.1.8, defined by ORF1a:S505F and S:Y144-, issue #1202

BQ.1.8.1 Alias of B.1.1.529.5.3.1.1.1.1.1.8.1, England/Australia, S:256L

BQ.1.8.2 Alias of B.1.1.529.5.3.1.1.1.1.1.8.2, England/Scotland, S:A688V

BQ.1.9 Alias of B.1.1.529.5.3.1.1.1.1.1.9, US lineage, defined by ORF1a:V2604I followed by S:346T (independent from BQ.1.1)

BQ.1.10 Alias of B.1.1.529.5.3.1.1.1.1.1.10, international lineage, 27600T

BQ.1.10.1 Alias of B.1.1.529.5.3.1.1.1.1.1.10.1, Italy/England/Denmark, S:H146L, issue #1189

BQ.1.11 Alias of B.1.1.529.5.3.1.1.1.1.1.11, international lineage, 29541T

BQ.1.12 Alias of B.1.1.529.5.3.1.1.1.1.1.12, international lineage, 28849T

BQ.1.13 Alias of B.1.1.529.5.3.1.1.1.1.1.13, international lineage, ORF1a:V627I

BQ.1.13.1 Alias of B.1.1.529.5.3.1.1.1.1.1.13.1 found mainly in USA and Europe, from pango-designation issue #1400

BQ.1.14 Alias of B.1.1.529.5.3.1.1.1.1.1.14, international lineage, 18570A

BQ.1.15 Alias of B.1.1.529.5.3.1.1.1.1.1.15, international lineage, ORF1a:L3116F

BQ.1.16 Alias of B.1.1.529.5.3.1.1.1.1.1.16, international lineage, ORF1a:A540V

BQ.1.17 Alias of B.1.1.529.5.3.1.1.1.1.1.17, Denmark/Germany, S:K444T mutated further to S:444M

BQ.1.18 Alias of B.1.1.529.5.3.1.1.1.1.1.18, Denmark/Austria, E:P71S, then S:R346T and S:Y144-

BQ.1.19 Alias of B.1.1.529.5.3.1.1.1.1.1.19, S:S494P

BQ.1.20 Alias of B.1.1.529.5.3.1.1.1.1.1.20, S:A348S

BQ.1.21 Alias of B.1.1.529.5.3.1.1.1.1.1.21, England/France, S:R346S, S:Y144-

BQ.1.22 Alias of B.1.1.529.5.3.1.1.1.1.1.22, Canada, S:R346T after C26681T

BQ.1.23 Alias of B.1.1.529.5.3.1.1.1.1.1.23, Singapore/Indonesia/Australia, A2653G and S:Y144-

BQ.1.24 Alias of B.1.1.529.5.3.1.1.1.1.1.24, South Africa, S:T240I, S:R346T, #1240

BQ.1.25 Alias of B.1.1.529.5.3.1.1.1.1.1.25, S:R346T, T8038C, T25569C, G26031A

BQ.1.25.1 Alias of B.1.1.529.5.3.1.1.1.1.1.25.1, found mainly in USA, from pango-designation issue #1451

BQ.1.26 Alias of B.1.1.529.5.3.1.1.1.1.1.26, found mainly in Denmark, from pango-designation issue #1315

BQ.1.26.1 Alias of B.1.1.529.5.3.1.1.1.1.1.26.1, found mainly in Denmark, from pango-designation issue #1369

BQ.1.27 Alias of B.1.1.529.5.3.1.1.1.1.1.27, USA/England, S:V445A

BQ.1.28 Alias of B.1.1.529.5.3.1.1.1.1.1.28, found mainly in USA, from pango-designation issue #1415

BQ.2 Alias of B.1.1.529.5.3.1.1.1.1.2, international, S:A522P

BE.1.2 Alias of B.1.1.529.5.3.1.1.2, mainly found in Costa Rica and USA, from pango-designation issue #923

BE.1.1.2 Alias of B.1.1.529.5.3.1.1.1.2, Germany lineage, defined by ORF9b:S50L

CC.1 Alias of B.1.1.529.5.3.1.1.1.2.1, Germany lineage, defined by S:N450D

BE.1.2.1 Alias of B.1.1.529.5.3.1.1.2.1, Panama, Canada, USA, defined by S:V445A, from issue #1095

BE.1.3 Alias of B.1.1.529.5.3.1.1.3, Finland and Estonia lineage

BE.1.4 Alias of B.1.1.529.5.3.1.1.4, America lineage, ORF1b:V1787I

BE.1.4.1 Alias of B.1.1.529.5.3.1.1.4.1, S:A701V

BE.1.4.2 Alias of B.1.1.529.5.3.1.1.4.2, S:R346T

BE.1.4.3 Alias of B.1.1.529.5.3.1.1.4.3, Mexico, S:V445A

BE.1.4.4 Alias of B.1.1.529.5.3.1.1.4.4, S:L176F

BE.2 Alias of B.1.1.529.5.3.1.2, Belgium lineage

BE.3 Alias of B.1.1.529.5.3.1.3, USA lineage

BE.4 Alias of B.1.1.529.5.3.1.4, Bangladesh, defined by ORF1a:T3308N, from issue #1115

BE.4.1 Alias of B.1.1.529.5.3.1.4.1, Bangladesh, defined by S:P209L, S:R346T, from issue #1115

BE.4.1.1 Alias of B.1.1.529.5.3.1.4.1.1, Bangladesh, defined by S:K444R, from issue #1115

CQ.1 Alias of B.1.1.529.5.3.1.4.1.1.1, Bangladesh, defined by S:Y144- and 11866T

CQ.1.1 Alias of B.1.1.529.5.3.1.4.1.1.1.1, Canada/England, S:A262S

CQ.2 Alias of B.1.1.529.5.3.1.4.1.1.2, Japan/US, defined by S:V445A

BE.4.2 Alias of B.1.1.529.5.3.1.4.2, Bangladesh, defined by S:K444N & S:N460K, from issue #1114

BE.5 Alias of B.1.1.529.5.3.1.5, South Africa, S:R346T, #1281

BE.6 Alias of B.1.1.529.5.3.1.6, France, S:R346S

BE.7 Alias of B.1.1.529.5.3.1.7, South Africa, S:R346T, #1280

BE.8 Alias of B.1.1.529.5.3.1.8, South Africa, S:R346T, #1278

BE.9 Alias of B.1.1.529.5.3.1.9, found mainly in Brazil, from pango-designation issue #1302

BE.10 Alias of B.1.1.529.5.3.1.10, S:K444T, S:N460K, mainly Brazil, from issue #1411

BA.5.3.2 Alias of B.1.1.529.5.3.2, mainly found in Germany, from pango-designation issue #697

BA.5.3.3 Alias of B.1.1.529.5.3.3, UK lineage

BA.5.3.4 Alias of B.1.1.529.5.3.4, Germany lineage

BA.5.3.5 Alias of B.1.1.529.5.3.5, mainly found in South Africa, from pango-designation issue #1042

BA.5.5 Alias of B.1.1.529.5.5, mainly found in USA, from pango-designation issue #656

BA.5.5.1 Alias of B.1.1.529.5.5.1, mainly found in USA, from pango-designation issue #873

BA.5.5.2 Alias of B.1.1.529.5.5.2, mainly found in USA, Canada, England and Ireland, from pango-designation issue #938

BA.5.5.3 Alias of B.1.1.529.5.5.3, USA lineage, from pango-designation issue #1015

BA.5.6 Alias of B.1.1.529.5.6, USA lineage

BA.5.6.1 Alias of B.1.1.529.5.6.1, Peru lineage

BA.5.6.2 Alias of B.1.1.529.5.6.2, mainly found in USA, Belgium and Mexico, from pango-designation issue #903

BA.5.6.3 Alias of B.1.1.529.5.6.3, mainly found in England, from pango-designation issue #1118

BA.5.6.4 Alias of B.1.1.529.5.6.4, found in USA and Europe, from pango-designation issue #1191

BW.1 Alias of B.1.1.529.5.6.2.1, Mexico lineage, from pango-designation issue #1059, defined by S:460K

BW.1.1 Alias of B.1.1.529.5.6.2.1.1, Mexico lineage, defined by S:V486A, issue #1341

BA.5.7 Alias of B.1.1.529.5.7, Australia lineage

BA.5.8 Alias of B.1.1.529.5.8, mainly found in England, USA, Denmark and Scotland, from pango-designation issue #743

BA.5.9 Alias of B.1.1.529.5.9, mainly found in Germany, Switzerland and Denmark, from pango-designation issue #753

BA.5.10 Alias of B.1.1.529.5.10, mainly found in Philippines, Canada, and USA, from pango-designation issue #936

BA.5.10.1 Alias of B.1.1.529.5.10.1, mainly from Philippines, defined by S:346T, from pango-designation issue #1031

DF.1 Alias of B.1.1.529.5.10.1.1, found mainly in UK, from pango-designation issue #1270

DF.1.1 Alias of B.1.1.529.5.10.1.1.1 found mainly in USA, from pango-designation issue #1494

BA.5.11 Alias of B.1.1.529.5.11, South Africa, C1627T, S:R346T, #1277





 

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