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onsdag 30 juli 2025

Uuden HPAIV H5N1 viruksen tutkimuksista

 

doi: 10.1080/22221751.2025.2532684. Epub 2025 Jul 25.

Emerging highly pathogenic H5N1 influenza triggers fibrotic remodeling in human airway organoids

Affiliations

The unpredictable evolution of IAVs makes future pandemics inevitable, highlighting the urgent need for preparedness to mitigate health, social, and economic impacts. H5N1 cases were first described in Hong Kong in 1997 when birds died from an outbreak of the disease, propagating to humans later in the same year [Citation33,Citation34]. Since the resurgence of H5N1 in 2002–2003, global efforts have been intensified to prevent its spread. The emergence of HPh/b-TX H5N1 represents a significant zoonotic threat, with its origin linked to infected dairy cows with highly pathogenic H5N1 from the clade 2.3.4.4b [Citation35]. This outbreak underscores the risk of cross-species transmission as the virus has spread within poultry, cattle, and humans, posing a significant public health threat [Citation36].

Infections with H5N1 cause severe pneumonia that can progress to lung fibrosis and respiratory failure [Citation31,Citation32]. While current FDA-approved antivirals reduce viral loads [Citation37], these antivirals are often ineffective in preventing lung injury and fibrosis, underscoring the need for novel therapeutic strategies targeting host responses. To better understand viral replication and pathogenesis, we employed HAO, a physiologically relevant model that recapitulates key aspects of the human lung environment.

We infected HAO with either rHPh-TX H5N1 or rHPb-TX H5N1 at MOI of 0.01 to assess viral replication efficiency. Our findings demonstrate that rHPh-TX H5N1 replicates more efficiently in HAO, serving as a surrogate for human airway epithelial tissues, compared to rHPb-TX H5N1. 

The elevated levels of infectious rHPh-TX H5N1 particles detected in secreted mucus indicate a greater degree of viral adaptation to the human airway epithelium. This efficient replication and shedding into mucus may facilitate aerosolization and increase the potential for person-to-person transmission. Additionally, the robust replication of rHPh-TX H5N1 in HAO was associated with a markedly strong induction of the IFN response, reflecting heightened host recognition and immune activation. 

Typically, H5N1 infection activates the RIG-I/MAVS signalling pathway, leading to IRF3 and NF-κB activation, which drives IFN-β production and ISG15 expression [Citation38–40]. 

 Our data show that rHPh-TX H5N1 induces IRF3 and NF-κB expression, which increase IFN-β and ISG15 levels. While ISG15 contributes to antiviral defense, its dual role in immune regulation can either enhance or suppress IRF3/NF-κB signalling, potentially influencing disease severity. 

In severe cases, H5N1 evades IFN pathways, leading to excessive NF-κB-driven inflammation (cytokine storm) and impaired IRF3-mediated responses, exacerbating lung damage [Citation41–43].

 Cytokine profiling of infected HAO revealed that rHPh-TX H5N1 induced elevated IL-6, IL-1β, TNF, CCL5, and IP-10 (CXCL10) levels

While these cytokines aid in viral clearance, prolonged inflammation may contribute to tissue injury and fibrosis (e.g. cytokine storm-induced lung injury).

Given the robust inflammatory response induced by rHPh-TX H5N1, we investigated its role in airway fibrogenesis during prolonged infection with rHPh-TX H5N1 compared to seasonal pH1N1. Our results indicate that prolonged infection of HAO with rHPh-TX H5N1 and pH1N1 induced fibroblast-like cells surrounding the infected area, associated with high cytokine response and α-SMA expression, indicating fibroblast-to-myofibroblast differentiation. 

It has been reported that H1N1 infections can rapidly progress to ARDS and contribute to pulmonary fibrosis [Citation25]. 

 Furthermore, severe IAV infections are associated with higher levels of TGF-β, indicating a relationship between disease severity and IAV-induced pulmonary fibrosis [Citation44]. This agrees with our findings showing that the rHPh-TX H5N1 infection induces higher TGF-β and ECM-associated gene expression than pH1N1. As such, the increased fibroblast activity in post-inflammatory repair pathways, with a pivotal role played by TGF-β and ECM, seems to be linked to IAV-induced pulmonary fibrosis.

We hypothesize that the EMT process plays a prominent role in fibrogenesis. During the EMT process, epithelial cells lose cell–cell attachment, polarity, and epithelial-specific markers, undergo cytoskeletal remodelling, and gain a mesenchymal phenotype [Citation45].

 Our results indicate that rHPh-TX H5N1 infection induces more pronounced EMT and ECM remodelling than pH1N1, as evidenced by the significantly higher upregulation of TGF-β and ECM-associated genes. We also observed the spindle shape of fibroblasts with intensive expression of α-SMA. In this regard, activated fibroblasts are described as spindle or stellate morphology cells with intracytoplasmic stress fibres, a contractile phenotype, expression of various mesenchymal markers such as α-SMA, and collagen production [Citation27].

We also observed that at 10-DPI, pro-inflammatory (TNF, IL-6, IL-8, IL-1β) and pro-fibrotic (TGF-β) mediators were upregulated, along with ECM components (FN, COL1A, COL3A, MMP2, and MMP9).

 Importantly, the upregulation of FN expression allows microbes to adhere to epithelial surfaces and contributes to the virulence of secondary bacterial infections [Citation46,Citation47]. 

Collectively, these factors contribute to a feedback loop of persistent lung damage and fibrosis [Citation26], emphasizing the need for targeted interventions to disrupt these pathways.

 Our data showed that the ROCK pathway affects fibroblast foci formation and ECM deposition. The ROCK1 and ROCK2 pathways are key regulators of fibrosis with distinct roles in tissue remodeling [Citation20]. Our results indicate that the inhibition of ROCK1 activity significantly reduced fibroblast foci formation and ECM deposition, whereas ROCK2 inhibition had a lesser effect. This suggests a dominant role for ROCK1 in airway fibrosis during H5N1 infection.

 Previous studies described the capacity of antifibrotic agents such as pirfenidone and nintedanib, FDA-approved to treat idiopathic pulmonary fibrosis (IPF), to reduce fibrosis through inhibiting key cytokines, including TGF-β and vascular endothelial growth factor (VEGF) [Citation48,Citation49]. Thus, unravelling the mechanisms of the ROCK signalling pathway in IAV-induced fibrogenesis may be essential for developing effective strategies to prevent and treat viral-induced pulmonary fibrosis, ultimately mitigating its long-term impact on respiratory health.

To our knowledge, this is the first study to characterize the profibrotic response triggered by the highly pathogenic HPh-TX H5N1 strain in human airway organoids. Our organoid model recapitulates the structural and functional complexity of the human airway epithelium, including multicellular composition and differentiation markers that are absent in traditional immortalized cell lines [Citation50]. Unlike animal models, this system provides a controlled, human-specific platform to study early epithelial responses to viral infection [Citation51].

 The novelty of our approach is further underscored by using a recent zoonotic H5N1 isolate (HPh-TX H5N1), associated with the 2024 human and bovine outbreaks in the U.S., which has not previously been evaluated in this context.

 While our study provides insights into H5N1 pathogenesis and triggering fibrogenesis, it also has limitations. Though physiologically relevant, the HAO model does not fully recapitulate in vivo immune responses or systemic factors that promote disease progression. HAO lacks immune cell components, limiting its ability to model immune cell recruitment and systemic cytokine amplification. While our findings demonstrate strong epithelial-intrinsic responses to rHPh-TX H5N1, they may underestimate the full extent of cytokine storm observed in vivo

 Future studies should evaluate the therapeutic potential of ROCK1 inhibitors in preclinical models of IAV-induced lung injury and fibrosis. Investigating the molecular links between IFN signalling, inflammation, and fibrotic remodelling will uncover additional therapeutic targets. Although our findings support the regulatory role of ROCK1, further investigation of downstream effectors, such as SMAD4 and p-MLC [Citation52,Citation53], is required to clarify the mechanisms underlying ROCK1-mediated fibrotic and inflammatory responses.

Future studies will include examining the fibrotic potential of other highly pathogenic IAV with zoonotic potential, such as H7N9. Additionally, we will assess the effects of currently approved antiviral therapies, such as neuraminidase inhibitors (e.g. Oseltamivir) and endonuclease inhibitors (e.g. Baloxavir), in combination with ROCK1 inhibitors, which could provide additive or synergistic benefits by simultaneously controlling virus-induced lung injury and mitigating fibrotic responses.

In conclusion, our findings highlight the efficient replication and innate immunity immune activation of H5N1 in HAO. H5N1 induces a robust inflammatory and fibrotic response, driven by NF-κB and TGF-β signalling, contributing to airway remodelling and fibrosis. 

 ROCK1 inhibition is a promising therapeutic strategy that warrants further investigation in appropriate in vivo models. These insights emphasize the importance of developing host-targeted therapies to prevent severe lung complications associated with influenza infections.

torsdag 24 juli 2025

Chikungunya-purkauksista jälleen uusia tietoja 2025 . Vektori myös AEDES-lajeja

 https://www.sciencedirect.com/science/article/pii/S1071909125000348?via%3Dihub

  • Tämån vuoden artikkelista olennaista tietoa CHIKV viruksesta ja vektorista.  
  •  LÄHDETIEDOT: 

    Chikungunya virus infection: A scoping review highlighting pediatric systemic and neurologic complications

    , , ,

Epidemiology

Aedes aegypti and Aedes albopictus are the primary vectors responsible for the transmission of several medically significant arboviruses, including dengue, Zika, yellow fever, and chikungunya viruses.4 Aedes aegypti, originally native to Africa, has expanded globally via maritime trade and now predominantly inhabits tropical and subtropical urban regions. It demonstrates endophilic behavior and a strong preference for human hosts, contributing to its high vectorial capacity in densely populated areas.5,6 In contrast, Aedes albopictus, native to Asia, has successfully colonized both tropical and temperate climates.
 
 Its ability to produce cold-resistant diapausing eggs enables overwintering in cooler Environmental temperature plays a critical role in modulating CHIKV transmission. Higher temperatures have been shown to accelerate viral replication within the mosquito and reduce the extrinsic incubation period, thereby enhancing infectivity.12,13 Consequently, climate change may facilitate the expansion of Aedes vectors into regions previously unsuitable for sustained transmission. This phenomenon has already manifested in parts of Europe, where local cases of CHIKV and other arboviral infections have recently 
emerged.14, 15, 16Microbiology
Chikungunya virus (CHIKV) is an enveloped, single-stranded, positive-sense RNA virus belonging to the Alphavirus genus within the Togaviridae family. Its envelope glycoproteins (gp.) , E1 and E2, form heterodimers that organize into trimeric spikes on the virion surface, mediating host cell entry. E1 contains a hydrophobic fusion peptide crucial for membrane fusion, while E2 facilitates receptor binding and is the principal target of host neutralizing antibodies. During maturation, the precursor protein p62—comprising E2 and E3—is processed in the trans-Golgi network (TGN), with E3 remaining associated with E2 until final virion assembly is complete. CHIKV engages host cell receptors including glycosaminoglycans (gag)  and the adhesion molecule Mxra8, which promotes viral attachment and internalization. Entry is predominantly mediated by clathrin-dependent endocytosis and macropinocytosis, both of which require endosomal acidification.17,18
emerged.14, 15, 16 environments, facilitating its global spread since the 1960s.6,7
 
In addition to viral and host factors, the mosquito’s microbiota significantly influences CHIKV replication and transmission. The gut microbiome can alter virus dynamics following a blood meal19 and modulate the vector's innate immune response.20 Among the microbial inhabitants, Wolbachia—an intracellular, maternally transmitted bacterium present in approximately 60 % of insect species—has emerged as a potential tool for vector control. While Aedes albopictus naturally harbors Wolbachia, Aedes aegypti does not.21 However, experimental introduction of Wolbachia into A. aegypti has been shown to suppress CHIKV replication, likely through immune priming mechanisms.21,22 

Clinical manifestations

Chikungunya virus (CHIKV) is associated with high attack rates during outbreaks (35–75 %), such as during the Réunion Island epidemic, where laboratory-confirmed cases totaled 16,050 and estimated cases reached 244,000 (35 % attack rate).28,29 CHIKV infection presents age-dependent clinical features and severity, ranging from mild febrile illness in children to severe multisystem disease in neonates and chronic sequelae in adults. Recognizing these patterns is essential to guide diagnosis, monitoring, and management.

Systemic manifestations

Overall, systemic chikungunya presents a spectrum of disease severity. While adults bear the brunt of chronic rheumatologic sequelae, neonates face the most acute risk of life-threatening complications, and children typically experience intermediate, self-limited illness with some risk of complications in infancy.

Neonates

They are at the highest risk for severe systemic disease, especially those born to viremic mother
 

onsdag 23 juli 2025

Neurodegeneratiivisen taudin taustalla lukuiset virukset

 https://pubmed.ncbi.nlm.nih.gov/37704050/

Epub 2023 Sep 12.Alzheimer's disease as a viral disease: Revisiting the infectious hypothesis
Affiliations Free article
Abstract. Alzheimer's disease (AD) represents the most frequent type of dementia in elderly people. Two major forms of the disease exist: sporadic - the causes of which have not yet been fully understood - and familial - inherited within families from generation to generation, with a clear autosomal dominant transmission of mutations in Presenilin 1 (PSEN1), 2 (PSEN2) or Amyloid Precursors Protein (APP) genes. The main hallmark of AD consists of extracellular deposits of amyloid-beta (Aβ) peptide and intracellular deposits of the hyperphosphorylated form of the tau protein. An ever-growing body of research supports the viral infectious hypothesis of sporadic forms of AD. In particular, it has been shown that several herpes viruses (i.e., HHV-1, HHV-2, HHV-3 or varicella zoster virus, HHV-4 or Epstein Barr virus, HHV-5 or cytomegalovirus, HHV-6A and B, HHV-7), flaviviruses (i.e., Zika virus, Dengue fever virus, Japanese encephalitis virus) as well as Human Immunodeficiency Virus (HIV), hepatitis viruses (HAV, HBV, HCV, HDV, HEV), SARS-CoV2, Ljungan virus (LV), Influenza A virus and Borna disease virus, could increase the risk of AD. Here, we summarized and discussed these results. Based on these findings, significant issues for future studies are also put forward.

Keywords: Alzheimer’s disease; Beta amyloid; Infectious hypothesis; Neurodegeneration; Tau protein; Virus. 

 

EBV virus mainitaan joukossa. Se varinaisesti o ehkä  ihmisen terveelle ja  täsmälliseksi kypsyneelle  immuunivasteelle tärkeä virittäjävirus.  Ehkä luonnollisen immuniteetin ja täsmällisen soluvälitteisen ja humoraalin  immuunivasteen  antivirussiiven  funktionaalinen kunto ontuu jollain tavalla, mitä ei  tiede ole vielä  pystynyt  havaitsemaan ja sen takia ei löydetä keinoja  immuunivasteen  kohentamiseksi riittävästi.

ekijöitä, jotka osallistuvat immuunijärjestelmiin on tietysti  kymmenin tuhansin,  Valtavasti tiedetäänkin  geeneistä ja proteiineista  jo, mutta  johtopäätöksien tekeminen ei ole joka miehen  hallussa. Vaikuttavia tekijöitä on myriadi, tähtitieteellinen lukumääsä. Siitä huolimatta  kehon resurssit  ovat samaa luokkaa. Voidaan ainakin tutkia, miten voimme vaikuttaa  ihmiselle annetun geneettisen resurssikirjon edullisimpaan  toimintaan terveyden ja hyvinvoinnin edistämiseksi. Joskuson kyse aivan perustavan yksinketaisistakin asioista ja esim.  elämäntavoista ja tottumuksista, joita voi  ihan tavallisen järjen avulla muokata  tervehdyttävään suunttaan.  

 

måndag 21 juli 2025

SvD tietoa USAn nautakarjassa esiintyvästä lintuiinfluenssaviruksesta A H5N1

Virusta ei ole tavattuEuroopan nautakarjassa tähän mennessä. 


Hotet från fågelinfluensan

Veterinär om upptäckten i USA: ”Svårt tro på först”

Trots att man i 30 år befarat att H5N1 blir nästa pandemi har viruset inte anpassat sig till människor. När mjölk­kor i USA nu oväntat smittats av fågel­influensa är forskarna på helspänn.



ps://www.svd.se/a/eM8Jx9/fagelinfluensan-h5n1-bland-kor-i-usa-forvanar-virusexperter

torsdag 17 juli 2025

APOLIPOPROTEIN B, Geeni APOB

 https://www.genecards.org/cgi-bin/carddisp.pl?gene=APOB&keywords=Apolipoprotein,B

ApoB-48  tutkimuksista: ApoB-48 syntetisoituu suolessa.  ApoB-100 syntetisoituu  maksassa. 

 https://pubmed.ncbi.nlm.nih.gov/40591354/

MTTP geeni, https://www.genecards.org/cgi-bin/carddisp.pl?gene=MTTP&keywords=MTTP

MTTP (Microsomal Triglyceride Transfer Protein) is a Protein Coding gene. Diseases associated with MTTP include Abetalipoproteinemia and Abdominal Obesity-Metabolic Syndrome 1. Among its related pathways are Plasma lipoprotein assembly, remodeling, and clearance and Cholesterol metabolism. Gene Ontology (GO) annotations related to this gene include protein heterodimerization activity and lipid transporter activity.  

MTP proteiini mikrosomaalinen triglyserejä erittävä proteiini  (  vaikuttaa suolistossa  ApoB48 ja  maksassa ApoB100 lipoproteiinieneritystä. 

 The microsomal triglyceride transfer protein (MTP) is essential for the secretion of apolipoprotein B (apoB)48- and apoB100-containing lipoproteins in the intestine and liver, respectively. Loss of function mutations in MTP cause abetalipoproteinemia.

 https://pubmed.ncbi.nlm.nih.gov/35931202/

KELCH-12 proteiinin osuus  poissuljettu DOI: 10.1152/ajpendo.00219.2025   KLHL12 has been reported to regulate the trafficking of large COPII vesicles from the ER to the Golgi, including VLDL secretion in the hepatoma cells. Lipid absorption in the intestine involves COPII-mediated trafficking of chylomicron in enterocytes. Our findings demonstrate that the deletion of intestinal Klhl12 does not significantly alter systemic lipid levels or body weight under different dietary challenges, suggesting that KLHL12 is not required for lipid absorption and chylomicron metabolism

https://pubmed.ncbi.nlm.nih.gov/40514653/ 

https://pubmed.ncbi.nlm.nih.gov/40514653/ 

AI

Further Research and Clinical Implications:
  • Mechanisms:
    While the link between ApoB and cancer is becoming clearer, the exact mechanisms by which ApoB influences tumor growth, metastasis, and response to therapy are still being investigated. 
    Clinical Applications:
  • Further research is needed to validate ApoB as a reliable prognostic marker and to explore its potential as a therapeutic target in various cancers. 
    Individualized Treatment: Understanding the role of ApoB in cancer may lead to more personalized treatment strategies, tailoring therapies based on individual ApoB levels and other relevant factors
  •  

    tisdag 15 juli 2025

    Veriryhmä OK on hyvin yleinen, CD147. Basigin (BSG) Ihan uutta tietoa on tästä CD147; nimellä EMMPRIN sitä löytää.

     EMMPRIN, matrix metalloproteinaasimolekyyli ja multifunktionaalinen solun tunnistajamolekyyli, Tuumorien kehittymisessä sillä on myös kriittistä osuutta.  Se on immunoglobuliinien suurperheeseen kuuluva. Basigin indusoi  matrixmetalloproteinaasien tuotantoa  fibroblastissa  kuten tuumorisoluissakin.  Se säätelee lymfosyyttivastetta ja monokarboksylaattikuljettajien ilmentuymistä sekä spermatogeneesiä. Se toimii  reseptorina syklofiliinien perheelle. Täten  se  voi kiihdyttää HIV-infektiotakin. 

    https://www.genecards.org/cgi-bin/carddisp.pl?gene=BSG&keywords=CD147

    Miten tämä veriryhmä CD147 (Ok,OK) ilmenee  ihmisen kehossa? Se koodautuu kromosomista 19p13.3 ja on hyvin yleinen ihmiskunnassa. Sitä esiintyy punasoluissa, kaikissa valkosoluissa  ihmisen leukemiasoluissa  kaikissa solulinjoissa. Varhaisessa hemopoieettisessa progeniittorisolussa ilmenee Ok(a) vahvasti;  ilmeneminen vähenee, kun  alkaa erytroidi kehitys (punasolulinja). 

     Geeni BSG ,joka koodaa Ok(a), sijaitsee kromosomissa19pter-p13.2. Alkuperäinen tuottaja anti-Ok(a)  vuonna 1979  eräällä Japanin pikkusaarella. Tunnetaan 8 japanilaista perhettä, joilla on Ok(a-).

    CD147  ,tämä on  Ok glykoproteiini  ja toimii molekulaarisena perustana  Ok(a-)  veriryhmälle.

    CD147:n  vahvasti glykosyloitu muoto indusoi MMP-production. 

    Leukosyyttiaktivaatioon assosioitunut glykoproteiini (intersellulaarinen adheesiotie: LFA-1/ICAM-1).

    Tuumorisoluissa CD147 indusoi kollagenaasia ja muiden  extrasellulaarisen matriksin matrixmetalloproteinaaseja  (MMP) . Se saattaa olla osallinen  tuumorien invaasioon ja metastasoitumiseen. https://pubmed.ncbi.nlm.nih.gov/22931464/ Hepatoma antigeeni.

    Rintasyöpä ja CD147:  https://pubmed.ncbi.nlm.nih.gov/?term=Breast+cancer%2C+Basigin+CD147&sort=date

    https://pubmed.ncbi.nlm.nih.gov/40370456/ 

    Terveessä kudoksessa  saattaa kudoksen  CD147:llä olla funktiota  sikiökehityksessä  tai  haavojen  paranemisessa, sillä se aiheuttaa dermaalisten fibroblastien lisääntymisät lisäämällä niiden  MMP-tuotantoa ja täten  se kiihdyttää kudosten uudelleen muovautumista.  

     CD147 on solupintareseptori ekstrasellulaariselle syklofiliiniA (CyPA)  proteiinille, jota  pakkautuu HIV-1 viruksen virioniin ja siten  se merkitsevästi vahvistaa   solun HIV-1 infektion varhaista  vaihetta. CD147 näyttää olevan kofaktori, joka välittää virukseen liittyvän  syklofiliinin  aktiivisuutta (PPIA/CyPA signalointitie) ) ja  sen takia HIV-1 virus tarvitsee sitä tehokkaaseen infektoimiseensa.   

    Myos SARS-1 Cov  vaati tätä infektoimiseen. Mutta SARS-2 Cov ei, vaikka ensin  niin  arveltiin.  GeneCards  mainitsee kyllä useampia viruksia: Tuhkarokkovirus, pentameerinen HCMV ja  myös malaria Plasmodi tarvitsee   tätä  reseptoria. 

    https://core.ac.uk/download/388350501.pdf 

    Eilisestä kirjastokäynnistä muistiin

     Biomedisiininen Kirjasto on näin  keskikesällä auki klo 12-16 välin, joten käväisin keskipäivällä katsomass abstraktit. Absttraktihylly oli täynnä esiteltäviä  kesän abstrakteja. Katsoin  muutaman minua eniten kiinnostavan, jos löytäisin intressiproteiineistani jonkin  lisätiedon.

     

    Ainsley Huang: The importance of membrane order in T-cell signalling and virus infection. ISBN 978-91-8115-201-2-.

    Tekstissä oli maininta myös Sars-2-Covid infektion aiheuttavasta  koronaviruksesta.  Kirjoitin muistiin   lauseita: 

    Sars-2Cov:  " distinct remodelling of host lipid metabolism especially in pathways supporting  membrane synthesis and viral replication".

    "A critical aspect... in Early mechanism involving exploitation of cholesterol-rich rafts in the host plasma membrane"

    "these microdomains cluster essential viral entry receptors such as ACE2, TMPRSS2 and CD147. (joka  tämä on veriryhmä Ok,OK, hyvin yleinen antigen, neurothelin, kr. 19p13.3), facilitating viral attachement, membrane fusion and internalization"  Kirjoitan erikseen otsikolla  Veriryhmä OK).

    !In clinical settings, COVIC-19 patients exhibit altered lipid profiles, characterized by reduced HDL-C, LDL-C, and ApoA1 levels along with elevated triglycerids- which are associated with increased inflammation and diseace severity" 

    .... "Targeting lipid metabolism  pathways and membrain domains  as theraputic strategy"...

    "Compounds as statins, methyl-beta-cyclodextrin and 25-OH-cholesterol may have potential to disrupt raft integrity, interfere with  virus p host interaction, and attenuate inflammation  making lipid-targeted intervention a promising avenue for antiviral therapy" 

    Tässä on  kommentoivat ajatukseni: Kun tein   kymmenen pisteen artikkeliani  K-vitamiinista, havaitsin  K1-vitamiinin  osuuden kolesteroliaineenvaihdunnan molekyyleihin . Ehkä dieetin kasviperäisen K1-vitamiinin  runsaampi käyttö   olisi eduksi  ihmisen kokonaisterveyden kannalta  noinkin  rasittavan ja kudoksia  suoranaisesti  sulattavan infektion aikana (carnage, kutsui joku   sars-2Cov- vaikutuksia sydämen  sarkomeereihin)  . Jos nyt lisäksi valitsee terapiakis edelleen kolesterolin  vähentämisen se on kaksiteräistä miekkaa. 

    Ei luulisi haittaavan lisätä  K1 vitamiinipitoista  , viimeistäänkin toipumisvaiheessa pitäisi huomata sen osuus  kehon kaikissa solukalvoissa. 

     

    H5N1 ja H1N1 vertailtu. H5N1 neurotrooppinen, hakeutuu aivoihin.

     Pubmed haku  "H5N1 neurotrophic"

    Vuodelta 2015 tietoa:  

    Induction of microglia activation after infection with the non-neurotropic A/CA/04/2009 H1N1 influenza virus.
    Sadasivan S, Zanin M, O'Brien K, Schultz-Cherry S, Smeyne RJ. PLoS One. 2015 Apr 10;10(4):e0124047. doi: 10.1371/journal.pone.0124047. eCollection 2015. PMID: 25861024 Free PMC article.
    Based on previous studies showing that the highly pathogenic avian influenza (HPAI) A/Vietnam/1203/2004 H5N1 virus was neurotropic, induced CNS inflammation and a transient parkinsonism, we examined the neurotropic and inflammatory potential of the CA/09 H1N1 virus in mice …
    Pathogenicity of an H5N1 avian influenza virus isolated in Vietnam in 2012 and reliability of conjunctival samples for diagnosis of infection.
    Bui VN, Dao TD, Nguyen TT, Nguyen LT, Bui AN, Trinh DQ, Pham NT, Inui K, Runstadler J, Ogawa H, Nguyen KV, Imai K. Virus Res. 2014 Jan 22;179:125-32. doi: 10.1016/j.virusres.2013.10.023. Epub 2013 Nov 5. PMID: 24211664 Free PMC article.
    The continued spread of highly pathogenic avian influenza virus (HPAIV) subtype H5N1 among poultry in Vietnam poses a potential threat to animals and public health. To evaluate the pathogenicity of a 2012 H5N1 HPAIV isolate and to assess the utility of conjunctival … 
     
    • Kambodjan  H5N1-virukseen sairastuneista  tiedetään  taudin oireissa olevan enkefalopatiaa, enkefaliittia.   Kuitenkaan PubMed ei vielä 15.8. 2025  tarjoa artikkeleita aiheesta; H5N1 encephalopathia, encephalitis , Result:0. 
    • Käytänpä kysymykseen tekoälyä  terapiamahdollisuuksien  ennalta arvioimiseksi:  "Virusenkefaliitin hoito".  Tässä AI-vastaus tosiaan antaa hyviä viitteitä  lähteisiin: duodecim.fi   ja perustavaa yleistä  neuvoa, koska spesifiä hoitoa ei  tässäkään tulevassa pandemiassa vielä ole( rokotetta nimittäin). Toivottavasti hyvä rokote löytyy ja on tuotettavissa  ja toivottavasti  tarpeeksi suuri osa  kansasta hyväksyy rokotuksen, jos  korkein tieteellinen virkataso  on hyväksynyt valmisteen punnittuaan   mikä  on suurin selviytymismahdollisuus   valtion   kansalaisille. WHO-jäsenyys on  tärkeä asia tässä vaiheessa ja toivottavasti mikään maa ei katkaise  välejään  WHO:hon  ja toivottavasti useampi  liittyy  joukkoon.  Yhtenäiset käsitteet  pitää edeltä saada  listattua. 

     

    POX virus ilmenee jälleen suurehkossa määrin maailmassa

     Monkeypox 

     https://pubmed.ncbi.nlm.nih.gov/37612863/

     Swinepox

    https://pubmed.ncbi.nlm.nih.gov/40643727/ 

    https://pubmed.ncbi.nlm.nih.gov/36408854/ 

    Cowpox  Kokoppor är en virussjukdom som främst drabbar nötkreatur, men som även kan smitta människor. Sjukdomen orsakas av kokoppsviruset och ger hudlesioner, ofta på händer och ansikte.Edward Jenner använde kokoppsviruset som grund för att utveckla det första vaccinet mot smittkoppor. Genom att vaccinera med kokoppsviruset, som var en mildare infektion, skapades immunitet mot den allvarligare smittkoppssjukdomen (AI)

    Smallpox, variola  

     https://www.who.int/health-topics/smallpox#tab=tab_1

    Poxviruses Taxonomy :  Look "Chordopoxviruses"

     are a large family of DNA viruses divided into two subfamilies: Chordopoxvirinae, which infect vertebrates, and Entomopoxvirinae, which infect invertebrates. 

     The Chordopoxvirinae are further divided into genera like Orthopoxvirus (which includes smallpox and monkeypox viruses), Parapoxvirus, and others. 

     Entomopoxvirinae genera include Alphaentomopoxvirus, Betaentomopoxvirus, and others, each infecting different insect orders. 

    Influenssojen historiasta muiden ruttojen joukossa Suomen Helsingissä sata vuotta sitten

     https://historia.hel.fi/fi/ilmiot/arjen-muuttuvat-kasvot/kulkutaudit-helsingin-historiassa

    Suomen  lähihistoriasta  eli 1800 luvusta, 1900 luvusta  historiamme on   sotien ja politiikan tapahtumien  ohella myös taistelua erilaisia tauteja ja ruttoja vastaan   ja samalla   kansanterveystyön  edistymisen heijastusta .

    (Kommentti:  Oman suvus historiasta voi mainita isoisän isän  Johannes Uotilan menehtymisen 1800-luvun puolivälin katovuosina ja isoisän  Juho H. Uotin muuton  Eteläpohjanmaalta Helsinkiin   1910-1911 aikoihin  suurperheen kanssa  toimentulon hankkimiseksi- suuret joukot olivat lähteneet Amerikkaan, ja hnkin oli  suunnittelemassa sinne päin kun poikia oli vielä viisi elossa. Sitten valittiin Helsinki, Sörnäinen. Ensimmiseksi  hankittiin  hautapaikka Hietaniemestä  yhdelle  poikalapselle, joka menehtyi  vatsatautiin, Vatsatauti oli ottanut   jo seitsemstä pojasta  kaksi muutakin pienenä. Isoisä  papin viran ohella antoi terveydellisiä neuvoja, siirtyi  kirkkovirasta  ihmisten  terveyttä hoittamaan  ja perusti luontaishoitojärjestelmän. Hän hoiti  mm espanjantautipotilaita. Hänen  hoitoihinsa  tultiin "kun lääkärit eivät enää antaneet toivoa". 

    Isoisän ja isoäidin muiston kunnioittamiseksi  jatketaan edelleen  heidän suunnittelemaansa   maaseudulla sijaitsevaa  (Uoti-luontaishoitojärjestelmän)  Luontaiskylpylää ( paikkaa, jossa potilaat voivat olla täyshoidossa luontaisten vesikylpyhoitojen  aikana). Kts.   (at)lempaalaspa

    lördag 5 juli 2025

    Fokusoin H5N1 viruksen hemaglutiniinin HA rakenteeseen PubMed haku

     

    281 results

    Single-Cell Analysis of Host Responses in Bovine Milk Somatic Cells (bMSCs) Following HPAIV Bovine H5N1 Influenza Exposure.
    Singh G, Kafle S, Assato P, Goraya M, Morozov I, Richt JA. Viruses. 2025 Jun 3;17(6):811. doi: 10.3390/v17060811. PMID: 40573402 Free PMC article.
    Unlike previously described subclinical influenza A virus (IAV) infections in cattle, H5N1 infection induced severe clinical symptoms, including respiratory distress, mastitis, and abnormal milk production. To understand the host immune responses and changes, particularly …
    Design, Synthesis and In Vivo Evaluation of a Candidate Fusion Epitopic Construct Vaccine Based on M2e, HA1, HA2, NA and NP Fragments of the Highly Pathogenic Avian H5N1 Influenza Virus.
    Hamidi A, Farzin H, Haghparast A. Arch Razi Inst. 2024 Aug 1;79(4):849-856. doi: 10.32592/ARI.2024.79.4.849. eCollection 2024 Aug. PMID: 40256578 Free PMC article.
    One highly regarded solution to this problem is to design and production of recombinant vaccines using the conserved peptide of influenza viruses. A search of international databases yielded the peptide sequence of the M2e fragment of H5N1 viruses isol …
    Conformational Variability Prediction of Influenza Virus Hemagglutinins with Amino Acid Mutations Using Supersecondary Structure Code.
    Izumi H. Methods Mol Biol. 2025;2870:63-78. doi: 10.1007/978-1-0716-4213-9_5. PMID: 39543031
    The deep neural network-based conformational variability prediction system of protein structures (SSSCPreds) can simultaneously predict locations of protein flexibility or rigidity and the shapes of those regions with high accuracy. The sequence flexibility/rigidity map ob …
    Proper development of long-lived memory CD4 T cells requires HLA-DO function.
    Song N, Welsh RA, Sadegh-Nasseri S. Front Immunol. 2023 Oct 16;14:1277609. doi: 10.3389/fimmu.2023.1277609. eCollection 2023. PMID: 37908352 Free PMC article.
    INTRODUCTION: HLA-DO (DO) is an accessory protein that binds DM for trafficking to MIIC and has peptide editing functions. DO is mainly expressed in thymic medulla and B cells. Using biochemical experiments, our lab has discovered that DO has differential effects on editin …
    The heterophilicic epitopes in conserved HA regions of human and avian influenza viruses can produce antibodies that bound to kidney tissue.
    Guo CY, Jin ZK, Feng Q, Feng YM, Sun LJ, Xu CX, Zhang YL. Microb Pathog. 2023 Dec;185:106331. doi: 10.1016/j.micpath.2023.106331. Epub 2023 Sep 9. PMID: 37678657 Free article.
    The purpose of this study was to analyze the relationship between heterophilic epitopes on H5N1 hemagglutinin (HA) and disease. The monoclonal antibody (mAb) against H5N1 was prepared, mAbs binding to human kidney tissue were screened, and the reactivities of mAbs w …
    Boost immunizations with NA-derived peptide conjugates achieve induction of NA inhibition antibodies and heterologous influenza protections.
    Liu DJ, Liu CC, Zhong XQ, Wu X, Zhang HH, Lu SW, Shen ZL, Song WW, Zhao SL, Peng YS, Zheng HP, Wan MY, Chen YQ, Deng L. Cell Rep. 2023 Jul 25;42(7):112766. doi: 10.1016/j.celrep.2023.112766. Epub 2023 Jul 7. PMID: 37421618 Free article.
    To overcome this, we rationally select the highly conserved peptides from the consensus amino acid sequence of the globular head domains of neuraminidase. ...Overall, this study provides proof of concept for a peptide-based sequential immunization strategy fo …
    Beyond the state of the art of reverse vaccinology: predicting vaccine efficacy with the universal immune system simulator for influenza.
    Russo G, Crispino E, Maleki A, Di Salvatore V, Stanco F, Pappalardo F. BMC Bioinformatics. 2023 Jun 5;24(1):231. doi: 10.1186/s12859-023-05374-1. PMID: 37271819 Free PMC article.
    When it was first introduced in 2000, reverse vaccinology was defined as an in silico approach that begins with the pathogen's genomic sequence. It concludes with a list of potential proteins with a possible, but not necessarily, list of peptide candidates that need …
    Next-generation T cell-activating vaccination increases influenza virus mutation prevalence.
    Bull MB, Gu H, Ma FNL, Perera LP, Poon LLM, Valkenburg SA. Sci Adv. 2022 Apr 8;8(14):eabl5209. doi: 10.1126/sciadv.abl5209. Epub 2022 Apr 6. PMID: 35385318 Free PMC article.
    To determine the potential for viral adaptation to T cell responses, we probed the full influenza virus genome by next-generation sequencing directly ex vivo from infected mice, in the context of an experimental T cell-based vaccine, an H5N1-based viral vectored vac …
    Infiltration of inflammatory macrophages and neutrophils and widespread pyroptosis in lung drive influenza lethality in nonhuman primates.
    Corry J, Kettenburg G, Upadhyay AA, Wallace M, Marti MM, Wonderlich ER, Bissel SJ, Goss K, Sturgeon TJ, Watkins SC, Reed DS, Bosinger SE, Barratt-Boyes SM. PLoS Pathog. 2022 Mar 10;18(3):e1010395. doi: 10.1371/journal.ppat.1010395. eCollection 2022 Mar. PMID: 35271686 Free PMC article.
    Here we used a unique translational model of lethal H5N1 influenza in cynomolgus macaques that utilizes inhalation of small-particle virus aerosols to define mechanisms driving lethal disease. RNA sequencing of lung tissue revealed an intense interferon response wit …
    Transcriptomic Profiling of Mouse Mast Cells upon Pathogenic Avian H5N1 and Pandemic H1N1 Influenza a Virus Infection.
    Tang Y, Wu H, Huo C, Zou S, Hu Y, Yang H. Viruses. 2022 Jan 29;14(2):292. doi: 10.3390/v14020292. PMID: 35215885 Free PMC article.
    To gain further insights into the host cellular responses of mouse mast cells with influenza A virus infection, such as the highly pathogenic avian influenza A virus H5N1 and the human pandemic influenza A H1N1, we employed high-throughput RNA sequencing to identify …