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tisdag 18 november 2014

EBOV ssGP Aminohappojärjestys (1-297) , toinen non-strukturelli erittynyt glykoproteiini, second non-structural secreted glykoprotein

http://www.ncbi.nlm.nih.gov/protein/AGB56787.1 
 
 
 
REFERENCE   2  (residues 1 to 297)
  AUTHORS   Carroll,S.A., Towner,J.S., Sealy,T.K., McMullan,L.K.,
            Khristova,M.L., Burt,F.J., Swanepoel,R., Rollin,P.E. and
            Nichol,S.T.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-NOV-2012) Viral Special Pathogens Branch, Centers for
            Disease Control & Prevention, 1600 Clifton Road, MS G-14, Atlanta,
            GA 30333, USA
COMMENT     Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..297
                     /organism="Zaire ebolavirus"
                     /isolate="EBOV/H.sapiens-tc/GAB/1996/1Mbie"
                     /host="Homo sapiens"
                     /db_xref="taxon:186538"
                     /country="Gabon"
                     /collection_date="1996"
     Protein         1..297
                     /product="ssGP"
     CDS             1..297
                     /gene="GP"
                     /coded_by="join(KC242795.1:6039..6922,
                     KC242795.1:6924..6933)"
                     /ribosomal_slippage
                     /note="second non-structural secreted glycoprotein;
                     secreted in a monomeric form; one A residue is deleted or
                     two additional A residues are inserted at the editing site
                     during transcription of the GP gene"
ORIGIN      
        1 mgvtgilqlp rdrfkrtsff lwviilfqrt fsiplgvihn stlqvsdvdk lvcrdklsst
       61 nqlrsvglnl egngvatdvp satkrwgfrs gvppkvvnye agewaencyn leikkpdgse
      121 clpaapdgir gfprcryvhk vsgtgpcagd fafhkegaff lydrlastvi yrgttfaegv
      181 vaflilpqak kdffsshplr epvnatedps sgyysttiry qatgfgtnet eylfevdnlt
      241 yvqlesrftp qfllqlneti ytsgkrsntt gkliwkvnpe idttigewaf wetkkph
//
Tummalla merkatut ovat samoja aminohappoja kuin pre-sGP molekyylissä, 
josta tämä osa on irronnut.  

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